5 items (Catenibacterium sp. CAG290) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDE28309.1	Transcriptional regulator MerR family; Product inferred by homology to UniProt. (132 aa)
	CDE28425.1	Transcriptional regulator MerR family; Product inferred by homology to UniProt. (327 aa)
	CDE28642.1	Transcriptional regulator MerR family; Product inferred by homology to UniProt. (128 aa)
	CDE27084.1	Transcriptional regulator MerR family; Product inferred by homology to UniProt. (285 aa)
	CDE27802.1	Transcriptional regulator MerR family; Product inferred by homology to UniProt. (130 aa)

Your Current Organism:

Catenibacterium sp. CAG290

NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDE27084.1	CDE27802.1	BN591_01505	BN591_01957	Transcriptional regulator MerR family; Product inferred by homology to UniProt.	Transcriptional regulator MerR family; Product inferred by homology to UniProt.	0.599
CDE27802.1	CDE27084.1	BN591_01957	BN591_01505	Transcriptional regulator MerR family; Product inferred by homology to UniProt.	Transcriptional regulator MerR family; Product inferred by homology to UniProt.	0.599
CDE27802.1	CDE28425.1	BN591_01957	BN591_00811	Transcriptional regulator MerR family; Product inferred by homology to UniProt.	Transcriptional regulator MerR family; Product inferred by homology to UniProt.	0.461
CDE28425.1	CDE27802.1	BN591_00811	BN591_01957	Transcriptional regulator MerR family; Product inferred by homology to UniProt.	Transcriptional regulator MerR family; Product inferred by homology to UniProt.	0.461