18 items (Coprobacillus sp. CAG826) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDD91118.1	Unknown; No significant homology to UniProt. (172 aa)
	CDD91119.1	tM2 domain protein; Product inferred by homology to UniProt. (106 aa)
	CDD91120.1	tM2 domain protein; Product inferred by homology to UniProt. (122 aa)
	CDD91121.1	Putative uncharacterized protein; Product inferred by homology to UniProt. (161 aa)
	CDD91122.1	alpha-L-glutamate ligase RimK family; Product inferred by homology to UniProt; Belongs to the RimK family. (293 aa)
	CDD91123.1	Rubrerythrin; Product inferred by homology to UniProt. (183 aa)
	CDD91124.1	Transcriptional regulator Fur family; Product inferred by homology to UniProt; Belongs to the Fur family. (127 aa)
	CDD91127.1	Unknown; No significant homology to UniProt. (893 aa)
	CDD91128.1	Unknown; No significant homology to UniProt. (424 aa)
	CDD91129.1	Unknown; No significant homology to UniProt. (244 aa)
	CDD91130.1	Repeat protein; Product inferred by homology to UniProt. (820 aa)
	CDD91761.1	Putative uncharacterized protein; Product inferred by homology to UniProt. (112 aa)
	CDD91762.1	Unknown; No significant homology to UniProt. (107 aa)
	CDD91763.1	Unknown; No significant homology to UniProt. (332 aa)
	CDD91764.1	Unknown; No significant homology to UniProt. (127 aa)
	CDD91765.1	Unknown; No significant homology to UniProt. (219 aa)
	CDD91766.1	Unknown; No significant homology to UniProt. (195 aa)
	CDD91767.1	Unknown; No significant homology to UniProt. (107 aa)

Your Current Organism:

Coprobacillus sp. CAG826

NCBI taxonomy Id: 1262857
Other names: C. sp. CAG:826, Coprobacillus sp. CAG:826

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDD91118.1	CDD91119.1	BN794_00021	BN794_00022	Unknown; No significant homology to UniProt.	tM2 domain protein; Product inferred by homology to UniProt.	0.773
CDD91118.1	CDD91120.1	BN794_00021	BN794_00023	Unknown; No significant homology to UniProt.	tM2 domain protein; Product inferred by homology to UniProt.	0.762
CDD91118.1	CDD91121.1	BN794_00021	BN794_00024	Unknown; No significant homology to UniProt.	Putative uncharacterized protein; Product inferred by homology to UniProt.	0.526
CDD91119.1	CDD91118.1	BN794_00022	BN794_00021	tM2 domain protein; Product inferred by homology to UniProt.	Unknown; No significant homology to UniProt.	0.773
CDD91119.1	CDD91120.1	BN794_00022	BN794_00023	tM2 domain protein; Product inferred by homology to UniProt.	tM2 domain protein; Product inferred by homology to UniProt.	0.778
CDD91119.1	CDD91121.1	BN794_00022	BN794_00024	tM2 domain protein; Product inferred by homology to UniProt.	Putative uncharacterized protein; Product inferred by homology to UniProt.	0.526
CDD91120.1	CDD91118.1	BN794_00023	BN794_00021	tM2 domain protein; Product inferred by homology to UniProt.	Unknown; No significant homology to UniProt.	0.762
CDD91120.1	CDD91119.1	BN794_00023	BN794_00022	tM2 domain protein; Product inferred by homology to UniProt.	tM2 domain protein; Product inferred by homology to UniProt.	0.778
CDD91120.1	CDD91121.1	BN794_00023	BN794_00024	tM2 domain protein; Product inferred by homology to UniProt.	Putative uncharacterized protein; Product inferred by homology to UniProt.	0.533
CDD91120.1	CDD91761.1	BN794_00023	BN794_00592	tM2 domain protein; Product inferred by homology to UniProt.	Putative uncharacterized protein; Product inferred by homology to UniProt.	0.697
CDD91121.1	CDD91118.1	BN794_00024	BN794_00021	Putative uncharacterized protein; Product inferred by homology to UniProt.	Unknown; No significant homology to UniProt.	0.526
CDD91121.1	CDD91119.1	BN794_00024	BN794_00022	Putative uncharacterized protein; Product inferred by homology to UniProt.	tM2 domain protein; Product inferred by homology to UniProt.	0.526
CDD91121.1	CDD91120.1	BN794_00024	BN794_00023	Putative uncharacterized protein; Product inferred by homology to UniProt.	tM2 domain protein; Product inferred by homology to UniProt.	0.533
CDD91121.1	CDD91122.1	BN794_00024	BN794_00025	Putative uncharacterized protein; Product inferred by homology to UniProt.	alpha-L-glutamate ligase RimK family; Product inferred by homology to UniProt; Belongs to the RimK family.	0.556
CDD91121.1	CDD91123.1	BN794_00024	BN794_00026	Putative uncharacterized protein; Product inferred by homology to UniProt.	Rubrerythrin; Product inferred by homology to UniProt.	0.403
CDD91122.1	CDD91121.1	BN794_00025	BN794_00024	alpha-L-glutamate ligase RimK family; Product inferred by homology to UniProt; Belongs to the RimK family.	Putative uncharacterized protein; Product inferred by homology to UniProt.	0.556
CDD91122.1	CDD91123.1	BN794_00025	BN794_00026	alpha-L-glutamate ligase RimK family; Product inferred by homology to UniProt; Belongs to the RimK family.	Rubrerythrin; Product inferred by homology to UniProt.	0.542
CDD91122.1	CDD91124.1	BN794_00025	BN794_00027	alpha-L-glutamate ligase RimK family; Product inferred by homology to UniProt; Belongs to the RimK family.	Transcriptional regulator Fur family; Product inferred by homology to UniProt; Belongs to the Fur family.	0.537
CDD91123.1	CDD91121.1	BN794_00026	BN794_00024	Rubrerythrin; Product inferred by homology to UniProt.	Putative uncharacterized protein; Product inferred by homology to UniProt.	0.403
CDD91123.1	CDD91122.1	BN794_00026	BN794_00025	Rubrerythrin; Product inferred by homology to UniProt.	alpha-L-glutamate ligase RimK family; Product inferred by homology to UniProt; Belongs to the RimK family.	0.542