STRINGSTRING
fumC fumC odhB odhB sucA sucA AHG83917.1 AHG83917.1 acnB acnB AHG83919.1 AHG83919.1 AHG84007.1 AHG84007.1 aceE aceE AHG84074.1 AHG84074.1 AHG84075.1 AHG84075.1 AHG84076.1 AHG84076.1 lpdA lpdA ackA ackA AHG84095.1 AHG84095.1 AHG84194.1 AHG84194.1 AHG84195.1 AHG84195.1 accD accD accA accA AHG84270.1 AHG84270.1 AHG84271.1 AHG84271.1 AHG84361.1 AHG84361.1 AHG84362.1 AHG84362.1 AHG84363.1 AHG84363.1 AHG84364.1 AHG84364.1 AHG84365.1 AHG84365.1 AHG84366.1 AHG84366.1 AHG84528.1 AHG84528.1 yjjI yjjI mdh mdh AHG84579.1 AHG84579.1 sucD sucD sucC sucC AHG84630.1 AHG84630.1 AHG84631.1 AHG84631.1 pflB pflB accC accC AHG84788.1 AHG84788.1 AHG84897.1 AHG84897.1 AHG84898.1 AHG84898.1 frdC frdC frdD frdD AHG85000.1 AHG85000.1 AHG85043.1 AHG85043.1 AHG85045.1 AHG85045.1 F543_230 F543_230 grcA grcA F543_9440 F543_9440
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fumCFumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (464 aa)
odhBDihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (408 aa)
sucA2-oxoglutarate dehydrogenase E1 component PRK09404; 2-oxoglutarate dehydrogenase E1 component of Gammaproteobacteria UniRef RepID=ODO1_HAEIN. (935 aa)
AHG83917.1Isocitrate dehydrogenase PRK07006; Isocitrate dehydrogenase [NADP] of Gammaproteobacteria UniRef RepID=B7UV18_PSEA8. (415 aa)
acnBBifunctional aconitate hydratase 2/2-methylisocitrate dehydratase PRK09238; Aconitate hydratase 2 of cellular organisms UniRef RepID=ACON2_PSEAE; Belongs to the aconitase/IPM isomerase family. (867 aa)
AHG83919.1Type II citrate synthase PRK05614; Citrate synthase I of Bacteria UniRef RepID=E3I1M6_RHOVT; Belongs to the citrate synthase family. (426 aa)
AHG84007.1Bifunctional malic enzyme oxidoreductase/phosphotransacetylase PRK07232; NADP-dependent malic enzyme of Bacteria UniRef RepID=MAO2_SALTY. (757 aa)
aceEPyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (887 aa)
AHG84074.1Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (529 aa)
AHG84075.1Pyruvate dehydrogenase dihydrolipoyltransacetylase PRK11854; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex of Pasteurellaceae UniRef RepID=ODP2_HAEIN. (104 aa)
AHG84076.1Dihydrolipoamide dehydrogenase PRK06467; Dihydrolipoyl dehydrogenase of cellular organisms UniRef RepID=DLDH_HAEIN; overlaps CDS with the same product name. (263 aa)
lpdADihydrolipoamide dehydrogenase PRK06467; Dihydrolipoyl dehydrogenase of cellular organisms UniRef RepID=DLDH_HAEIN; overlaps CDS with the same product name. (241 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (399 aa)
AHG84095.1Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (711 aa)
AHG84194.1Hypothetical protein; KLLA0D19929p of cellular organisms UniRef RepID=B5FV81_KLULA. (232 aa)
AHG84195.1Hypothetical protein; KLLA0D19929p of cellular organisms UniRef RepID=B5FV81_KLULA. (85 aa)
accDAcetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (298 aa)
accAAcetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (317 aa)
AHG84270.1Multifunctional fatty acid oxidation complex subunit alpha PRK11154; Fatty oxidation complex, alpha subunit of Haemophilus parasuis UniRef RepID=B8F4S2_HAEPS; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (714 aa)
AHG84271.13-ketoacyl-CoA thiolase PRK08963; Acetyl-CoA acetyltransferase of Pasteurellaceae UniRef RepID=B0BPH2_ACTPJ; Belongs to the thiolase-like superfamily. Thiolase family. (434 aa)
AHG84361.1GntP family transporter; H+/gluconate symporter and permeases COG2610; GntP family transporter of Bacteria UniRef RepID=Q4FRS9_PSYA2. (462 aa)
AHG84362.13-hydroxybutyrate dehydrogenase PRK12429; D-beta-hydroxybutyrate dehydrogenase of Bacteria UniRef RepID=Q08MV7_STIAD. (252 aa)
AHG84363.1Acyltransferase PRK05790; Acetyl-CoA acetyltransferase of cellular organisms UniRef RepID=THIL_CUPNH; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
AHG84364.1Short-chain fatty acids transporter of Bacteria UniRef RepID=ATOE_HAEIN. (447 aa)
AHG84365.1Acetate CoA-transferase subunit beta of Bacteria UniRef RepID=ATOA_HAEIN. (219 aa)
AHG84366.1acetyl-CoA:acetoacetyl-CoA transferase subunit alpha PRK09920; Acetate CoA-transferase subunit alpha of Bacteria UniRef RepID=ATOD_HAEIN. (215 aa)
AHG84528.1Hypothetical protein; UPI00021ACE07 cluster of unknown UniRef RepID=UPI00021ACE07. (261 aa)
yjjIUncharacterized protein HI_0521 of Bacteria UniRef RepID=Y521_HAEIN. (509 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. (314 aa)
AHG84579.1Acylphosphatase PRK14448; Acylphosphatase of Aggregatibacter actinomycetemcomitans UniRef RepID=C9R5C3_AGGAD. (114 aa)
sucDSuccinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (289 aa)
sucCSuccinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa)
AHG84630.1Bifunctional acetaldehyde-CoA/alcohol dehydrogenase PRK13805; Iron-containing alcohol dehydrogenase of Bacteria UniRef RepID=C7QZE3_JONDD; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (896 aa)
AHG84631.1Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (245 aa)
pflBFormate acetyltransferase of cellular organisms UniRef RepID=PFLB_HAEIN. (774 aa)
accCBiotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (447 aa)
AHG84788.1Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (155 aa)
AHG84897.1Fumarate reductase flavoprotein subunit PRK09231; Fumarate reductase flavoprotein subunit of cellular organisms UniRef RepID=FRDA_HAEIN. (596 aa)
AHG84898.1Fumarate reductase iron-sulfur subunit PRK12385; Fumarate reductase iron-sulfur subunit of Proteobacteria UniRef RepID=FRDB_HAEIN; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (255 aa)
frdCReductase; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (129 aa)
frdDReductase; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (114 aa)
AHG85000.1D-isomer specific 2-hydroxyacid dehydrogenase family protein of Proteobacteria UniRef RepID=Q4KE06_PSEF5. (352 aa)
AHG85043.1L-2,4-diaminobutyrate decarboxylase of Bacteria UniRef RepID=B0BU02_ACTPJ. (510 aa)
AHG85045.1Diaminobutyrate--2-oxoglutarate aminotransferase PRK06931; Diaminobutyrate--2-oxoglutarate aminotransferase of Bacteria UniRef RepID=DAT_HAEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (453 aa)
F543_230Methylmalonate-semialdehyde dehydrogenase of Proteobacteria UniRef RepID=Q0K5K0_CUPNH. (504 aa)
grcAAutonomous glycyl radical cofactor; Acts as a radical domain for damaged PFL and possibly other radical proteins. (127 aa)
F543_9440Acyl-CoA dehydrogenases COG1960; Acyl-CoA dehydrogenase of Bacteria UniRef RepID=B8F3P3_HAEPS. (354 aa)
Your Current Organism:
Bibersteinia trehalosi
NCBI taxonomy Id: 1263831
Other names: B. trehalosi USDA-ARS-USMARC-189, Bibersteinia trehalosi USDA-ARS-USMARC-189
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