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dapB dapB AHG84126.1 AHG84126.1 pyrD pyrD F543_1470 F543_1470 F543_9440 F543_9440 hemN hemN F543_8920 F543_8920 F543_5590 F543_5590 F543_3290 F543_3290 hutZ hutZ frdD frdD frdC frdC dusC dusC AHG84898.1 AHG84898.1 AHG84897.1 AHG84897.1 hemW hemW dusA dusA dusB dusB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (270 aa)
AHG84126.1Reductase; Enoyl-(acyl carrier protein) reductase PRK07984; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI of root UniRef RepID=FABI_HAEIN. (260 aa)
pyrDDihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (342 aa)
F543_1470Protoporphyrinogen oxidase PRK11104; Protoporphyrinogen oxidase of Pasteurellaceae UniRef RepID=B8F801_HAEPS. (172 aa)
F543_9440Acyl-CoA dehydrogenases COG1960; Acyl-CoA dehydrogenase of Bacteria UniRef RepID=B8F3P3_HAEPS. (354 aa)
hemNCoproporphyrinogen III oxidase PRK09249; Oxygen-independent coproporphyrinogen-III oxidase of Gammaproteobacteria UniRef RepID=HEMN_SALTI; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (455 aa)
F543_8920T-protein; Bifunctional chorismate mutase/prephenate dehydrogenase PRK11199; T-protein of Bacteria UniRef RepID=TYRA_HAEIN. (374 aa)
F543_5590Dihydroorotate dehydrogenase 1A PRK02506; Dihydroorotate dehydrogenase of Pasteurellaceae UniRef RepID=B0UTZ1_HAES2. (327 aa)
F543_3290UDP-N-acetyl-D-mannosamine dehydrogenase PRK11064; UDP-N-acetyl-D-mannosamine dehydrogenase of Proteobacteria UniRef RepID=B4F1W0_PROMH; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (409 aa)
hutZHeme iron utilization protein COG0748; uncharacterized protein of Actinobacillus pleuropneumoniae UniRef RepID=E0EEH9_ACTPL. (176 aa)
frdDReductase; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (114 aa)
frdCReductase; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (129 aa)
dusCtRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily. (322 aa)
AHG84898.1Fumarate reductase iron-sulfur subunit PRK12385; Fumarate reductase iron-sulfur subunit of Proteobacteria UniRef RepID=FRDB_HAEIN; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (255 aa)
AHG84897.1Fumarate reductase flavoprotein subunit PRK09231; Fumarate reductase flavoprotein subunit of cellular organisms UniRef RepID=FRDA_HAEIN. (596 aa)
hemWOxygen-independent coproporphyrinogen-III oxidase-like protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (385 aa)
dusAtRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (330 aa)
dusBtRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily. (318 aa)
Your Current Organism:
Bibersteinia trehalosi
NCBI taxonomy Id: 1263831
Other names: B. trehalosi USDA-ARS-USMARC-189, Bibersteinia trehalosi USDA-ARS-USMARC-189
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