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| | raiA | Translation inhibitor protein RaiA PRK10324; Sigma 54 modulation protein/ribosomal protein S30EA of Mannheimia haemolytica serotype A2 UniRef RepID=E2NX34_PASHA. (86 aa) |
| | pdxH | Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (210 aa) |
| | cmoB | tRNA (mo5U34)-methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. (321 aa) |
| | fumC | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (464 aa) |
| | odhB | Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (408 aa) |
| | sucA | 2-oxoglutarate dehydrogenase E1 component PRK09404; 2-oxoglutarate dehydrogenase E1 component of Gammaproteobacteria UniRef RepID=ODO1_HAEIN. (935 aa) |
| | AHG83893.1 | Replicative DNA helicase PRK06904; Replicative DNA helicase of Gammaproteobacteria UniRef RepID=A6VP89_ACTSZ; overlaps CDS with the same product name. (181 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (302 aa) |
| | AHG83905.1 | Uncharacterized protein HI_0095 of Bacteria UniRef RepID=Y095_HAEIN. (271 aa) |
| | citE | Citrate lyase subunit beta of Bacteria UniRef RepID=CITE_HAEIN; Belongs to the HpcH/HpaI aldolase family. (295 aa) |
| | citF | Citrate lyase alpha chain of Bacteria UniRef RepID=CILA_HAEIN. (502 aa) |
| | AHG83923.1 | DNA-binding transcriptional regulator CpxR PRK10955; Transcriptional regulatory protein CpxR of Bacteria UniRef RepID=CPXR_ECO57. (238 aa) |
| | ffh | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] (459 aa) |
| | glgC | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (426 aa) |
| | AHG83976.1 | High-affinity Fe2+/Pb2+ permease COG0672; FTR1 family iron permease of Gammaproteobacteria UniRef RepID=C5S155_9PAST. (561 aa) |
| | dcd | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. (194 aa) |
| | dnaX | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (457 aa) |
| | AHG83996.1 | DNA polymerase III subunits gamma and tau PRK07994; DNA polymerase III subunits gamma and tau of Gammaproteobacteria UniRef RepID=B8F323_HAEPS. (205 aa) |
| | AHG83997.1 | ABC transporter ATP-binding protein YadG; ABC-type multidrug transport system, ATPase component COG1131; Uncharacterized ABC transporter ATP-binding protein YadG of Bacteria UniRef RepID=YADG_ECOLI. (294 aa) |
| | AHG83998.1 | Inner membrane transport permease PRK15066; Inner membrane transport permease yadH of Bacteria UniRef RepID=YADH_ECO57. (254 aa) |
| | AHG84006.1 | Acetolactate synthase 3 catalytic subunit PRK06882; Acetolactate synthase isozyme 3 large subunit of Proteobacteria UniRef RepID=ILVI_ECOLI. (573 aa) |
| | AHG84008.1 | Hemolysin activation/secretion protein COG2831; Hemolysin activation/secretion protein of Gammaproteobacteria UniRef RepID=B0BPQ3_ACTPJ. (584 aa) |
| | AHG84019.1 | Hypothetical protein; Restriction endonuclease S subunits COG0732; Restriction modification system DNA specificity domain protein of Bacteria UniRef RepID=D5EDF9_AMICL. (368 aa) |
| | rpsB | 30S ribosomal protein S2 PRK05299; 30S ribosomal protein S2 of Proteobacteria UniRef RepID=RS2_VIBC3; Belongs to the universal ribosomal protein uS2 family. (238 aa) |
| | AHG84026.1 | Antimicrobial peptide ABC transporter periplasmic binding protein SapA PRK15109; Peptide transport periplasmic protein SapA of Pasteurellaceae UniRef RepID=B8F656_HAEPS. (554 aa) |
| | AHG84066.1 | Primosomal replication protein N'' COG3923; uncharacterized protein of Actinobacillus UniRef RepID=B0BNS4_ACTPJ. (167 aa) |
| | aceE | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (887 aa) |
| | AHG84074.1 | Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (529 aa) |
| | AHG84075.1 | Pyruvate dehydrogenase dihydrolipoyltransacetylase PRK11854; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex of Pasteurellaceae UniRef RepID=ODP2_HAEIN. (104 aa) |
| | galU | UTP--glucose-1-phosphate uridylyltransferase subunit GalU PRK13389; UTP--glucose-1-phosphate uridylyltransferase of root UniRef RepID=GALU_HAEIN. (295 aa) |
| | F543_1230 | Restriction endonuclease S subunits COG0732; Probable type I restriction-modification system specificity protein of Haemophilus influenzae UniRef RepID=A9YUI0_HAEIF. (431 aa) |
| | AHG84126.1 | Reductase; Enoyl-(acyl carrier protein) reductase PRK07984; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI of root UniRef RepID=FABI_HAEIN. (260 aa) |
| | F543_1270 | Transcriptional activator FtrA PRK09393; AraC family transcriptional regulator of Gammaproteobacteria UniRef RepID=C8KYS2_9PAST. (315 aa) |
| | xseA | Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (496 aa) |
| | moaA | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (173 aa) |
| | AHG84146.1 | Molybdenum cofactor biosynthesis protein A PRK00164; Molybdenum cofactor biosynthesis protein A of root UniRef RepID=MOAA_ECO45; overlaps CDS with the same product name. (164 aa) |
| | moaC | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (158 aa) |
| | AHG84169.1 | Cytochrome b subunit of formate dehydrogenase COG2864; Formate dehydrogenase (Quinone-dependent) cytochrome b subunit of Proteobacteria UniRef RepID=A4WAJ8_ENT38. (226 aa) |
| | uvrA | UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (942 aa) |
| | AHG84182.1 | Reductase; Ribonucleotide-diphosphate reductase subunit beta PRK09101; Ribonucleoside-diphosphate reductase class Ia beta subunit of root UniRef RepID=Q081T5_SHEFN. (359 aa) |
| | AHG84183.1 | Reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (756 aa) |
| | AHG84185.1 | Excinuclease ABC subunit B PRK05298; Excinuclease ABC subunit B of Gammaproteobacteria UniRef RepID=A4NXJ6_HAEIF. (87 aa) |
| | uvrB | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (672 aa) |
| | znuB | High-affinity zinc transporter membrane component PRK09543; High-affinity zinc uptake system membrane protein znuB of Bacteria UniRef RepID=ZNUB_HAEIN. (272 aa) |
| | AHG84210.1 | Predicted glutamine amidotransferase COG0121; glutamine amidotransferase HI_1037 of Pasteurellaceae UniRef RepID=Y1037_HAEIN. (161 aa) |
| | AHG84211.1 | Predicted glutamine amidotransferase COG0121; Class II glutamine amidotransferase domain protein of Pasteurellaceae UniRef RepID=F9Q659_9PAST. (86 aa) |
| | AHG84218.1 | Molybdopterin synthase small subunit PRK11130; Molybdopterin synthase sulfur carrier subunit of cellular organisms UniRef RepID=MOAD_HAEIN. (81 aa) |
| | accD | Acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (298 aa) |
| | accA | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (317 aa) |
| | AHG84258.1 | Anaerobic ribonucleoside triphosphate reductase PRK09263; Anaerobic ribonucleoside-triphosphate reductase of root UniRef RepID=NRDD_HAEIN. (708 aa) |
| | AHG84264.1 | Transcriptional regulators COG1737; Uncharacterized HTH-type transcriptional regulator HI_0143 of Gammaproteobacteria UniRef RepID=Y143_HAEIN. (288 aa) |
| | AHG84283.1 | Extracellular solute-binding protein family 5 of Bacteria UniRef RepID=B8HGS8_ARTCA. (530 aa) |
| | F543_1430 | ABC-type amino acid transport system, permease component COG0765; L-cystine transport system permease protein tcyB of Bacteria UniRef RepID=TCYB_BACSU. (238 aa) |
| | AHG84297.1 | FAD-dependent monooxygenase; 2-octaprenyl-6-methoxyphenol hydroxylase PRK08850; FAD-dependent monooxygenase of Haemophilus parasuis UniRef RepID=B8F390_HAEPS. (394 aa) |
| | rapZ | Hypothetical protein; Displays ATPase and GTPase activities. (287 aa) |
| | AHG84300.1 | Lipopolysaccharide ABC transporter ATP-binding protein PRK10895; Lipopolysaccharide export system ATP-binding protein LptB of root UniRef RepID=LPTB_HAEIN. (241 aa) |
| | modC | Molybdenum import ATP-binding protein ModC; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (351 aa) |
| | AHG84320.1 | DNA-binding protein; Predicted transcriptional regulator COG2944; DNA-binding protein of Neisseria meningitidis UniRef RepID=F0AVN6_NEIME. (88 aa) |
| | AHG84322.1 | DNA-binding transcriptional regulator ModE PRK10676; Transcriptional regulator modE of Pasteurellaceae UniRef RepID=MODE_HAEIN. (282 aa) |
| | AHG84326.1 | Oligopeptide ABC transporter substrate-binding protein OppA PRK15104; oligopeptide transporter, periplasmic-binding protein, OppA of Haemophilus parasuis UniRef RepID=B8F467_HAEPS. (517 aa) |
| | leuC | 3-isopropylmalate dehydratase large subunit-like protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (468 aa) |
| | leuD | 3-isopropylmalate dehydratase large subunit-like protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (219 aa) |
| | glsA | Glutaminase PRK00971; Glutaminase of Bacteroidetes UniRef RepID=A3U907_CROAH; Belongs to the glutaminase family. (305 aa) |
| | ubiE | Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (250 aa) |
| | iolD | IolD; Acetolactate synthase COG3962; IolD of Bacteria UniRef RepID=D4GD77_PANAM; Belongs to the TPP enzyme family. (644 aa) |
| | AHG84385.1 | Cytochrome d terminal oxidase subunit 1 PRK15097; Cytochrome d ubiquinol oxidase subunit 1 of root UniRef RepID=CYDA_AZOVI. (516 aa) |
| | F543_1530 | Hypothetical protein; Bifunctional HTH-domain containing protein/aminotransferase PRK13355; uncharacterized protein of Actinobacillus minor NM305 UniRef RepID=C5RZB7_9PAST. (122 aa) |
| | tatA | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (74 aa) |
| | priB | Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. (62 aa) |
| | tatB | Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (190 aa) |
| | AHG84419.1 | Hemolysin activation/secretion protein COG2831; Hemolysin activation protein of Neisseria meningitidis UniRef RepID=C6S5D9_NEIML. (571 aa) |
| | tatC | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (247 aa) |
| | rpoZ | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (93 aa) |
| | AHG84445.1 | Reductase; Response regulator COG4566; Tetrathionate reductase regulon response regulator of Gammaproteobacteria UniRef RepID=A7JTF8_PASHA. (203 aa) |
| | pdxT | Glutamine amidotransferase subunit pdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. (188 aa) |
| | AHG84477.1 | Hypothetical protein; DNA replication initiation factor PRK06893; Uncharacterized protein HI_1225.1 of Pasteurellaceae UniRef RepID=Y122B_HAEIN; Belongs to the DnaA family. HdA subfamily. (238 aa) |
| | recG | ATP-dependent DNA helicase recG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (693 aa) |
| | AHG84485.1 | Nickel-binding periplasmic protein nikA of Pasteurellaceae UniRef RepID=B8F6R8_HAEPS. (522 aa) |
| | AHG84496.1 | DNA polymerase III psi subunit protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. (140 aa) |
| | potA | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (370 aa) |
| | ruvA | Holliday junction DNA helicase motor protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (201 aa) |
| | ruvB | Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (334 aa) |
| | AHG84521.1 | DNA-binding protein for site-specific recombination and inversion; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family. (98 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (273 aa) |
| | rpsS | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (69 aa) |
| | uvrC | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (611 aa) |
| | rplV | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (110 aa) |
| | AHG84598.1 | Antimicrobial peptide ABC transporter periplasmic binding protein SapA PRK15109; Periplasmic dipeptide transport protein of Bacteria UniRef RepID=DPPA_ECOLI. (529 aa) |
| | AHG84600.1 | Antimicrobial peptide ABC transporter periplasmic binding protein SapA PRK15109; Periplasmic dipeptide transport protein of Bacteria UniRef RepID=DPPA_ECOLI. (535 aa) |
| | AHG84605.1 | Dipeptide transporter ATP-binding subunit PRK11308; Dipeptide transport ATP-binding protein DppF of cellular organisms UniRef RepID=DPPF_HAEIN; Belongs to the ABC transporter superfamily. (290 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (730 aa) |
| | F543_1750 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (216 aa) |
| | AHG84614.1 | ABC transporter protein; ABC-type spermidine/putrescine transport systems, ATPase components COG3842; ABC transporter of Gammaproteobacteria UniRef RepID=B0UTX3_HAES2; Belongs to the ABC transporter superfamily. (336 aa) |
| | F543_1760 | DNA polymerase III subunit beta PRK05643; DNA polymerase III subunit beta of Gammaproteobacteria UniRef RepID=DPO3B_VIBCH; overlaps CDS with the same product name. (153 aa) |
| | sucD | Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (289 aa) |
| | malK | Maltose/maltodextrin import ATP-binding protein MalK; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family. (369 aa) |
| | AHG84714.1 | Maltoporin PRK09360; Maltoporin of Gammaproteobacteria UniRef RepID=LAMB_ACTSZ. (423 aa) |
| | AHG84720.1 | Heme-binding protein A; Antimicrobial peptide ABC transporter periplasmic binding protein SapA PRK15109; Heme-binding protein A of Pasteurellaceae UniRef RepID=HBPA_HAEIN. (547 aa) |
| | gpsA | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase PRK00094; Glycerol-3-phosphate dehydrogenase [NAD(P)+] of cellular organisms UniRef RepID=GPDA_PHOLL; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (340 aa) |
| | accC | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (447 aa) |
| | AHG84788.1 | Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (155 aa) |
| | rpmF | 50S ribosomal protein L32 PRK01110; 50S ribosomal protein L32 of root UniRef RepID=RL32_METCA; Belongs to the bacterial ribosomal protein bL32 family. (53 aa) |
| | AHG84826.1 | ABC-type polysaccharide/polyol phosphate export systems, permease component COG1682; Capsule polysaccharide export inner-membrane protein BexB of Proteobacteria UniRef RepID=BEXB2_HAEIF. (265 aa) |
| | AHG84841.1 | DNA polymerase III subunit chi of Pasteurellaceae UniRef RepID=HOLC_HAEIN. (139 aa) |
| | F543_2010 | Uncharacterized protein of Actinobacillus UniRef RepID=C5S0Y7_9PAST. (141 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (584 aa) |
| | rpsL | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (124 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | F543_2020 | Uncharacterized protein of Mannheimia haemolytica UniRef RepID=A7JPM3_PASHA. (178 aa) |
| | AHG84898.1 | Fumarate reductase iron-sulfur subunit PRK12385; Fumarate reductase iron-sulfur subunit of Proteobacteria UniRef RepID=FRDB_HAEIN; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (255 aa) |
| | frdC | Reductase; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (129 aa) |
| | frdD | Reductase; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (114 aa) |
| | AHG84901.1 | DNA uptake protein and DNA-binding proteins COG1555; uncharacterized protein of Aggregatibacter aphrophilus UniRef RepID=C6AQH5_AGGAN. (201 aa) |
| | rnpA | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (112 aa) |
| | AHG84972.1 | DNA polymerase III subunit delta' PRK06871; DNA polymerase III subunit delta of Pasteurellaceae UniRef RepID=B8F7F9_HAEPS. (329 aa) |
| | oxyR | DNA-binding transcriptional regulator OxyR PRK11151; Hydrogen peroxide-inducible genes activator protein of cellular organisms UniRef RepID=OXYR_HAEIN; Belongs to the LysR transcriptional regulatory family. (296 aa) |
| | AHG85003.1 | LysR family transcriptional regulator of Moraxella catarrhalis UniRef RepID=D5VAY9_MORCR; Belongs to the LysR transcriptional regulatory family. (297 aa) |
| | recC | Exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (1095 aa) |
| | ompA | Outer membrane protein A PRK10808; Outer membrane protein P5 of Pasteurellaceae UniRef RepID=B3H2D9_ACTP7; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. (360 aa) |
| | AHG85020.1 | Outer membrane protein A PRK10808; Outer membrane protein P5 of Pasteurellaceae UniRef RepID=B3H2D9_ACTP7; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. (363 aa) |
| | arcA | Two-component response regulator PRK11173; Aerobic respiration control protein ArcA of Gammaproteobacteria UniRef RepID=B5FAK4_VIBFM. (238 aa) |
| | AHG85093.1 | Transcriptional regulator, MarR family of Cryptobacterium curtum DSM 15641 UniRef RepID=C7MLL5_CRYCD. (138 aa) |
| | AHG85096.1 | Transcriptional regulator, HxlR; Predicted transcriptional regulators COG1733; Transcriptional regulator, HxlR family of Gammaproteobacteria UniRef RepID=C6AKJ4_AGGAN. (118 aa) |
| | AHG85164.1 | Possible flavin-dependent dehydrogenase of Pasteurellaceae UniRef RepID=A7JRR3_PASHA. (314 aa) |
| | AHG85198.1 | FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family of Staphylococcus warneri VCU121 UniRef RepID=F3SQM5_STAWA. (422 aa) |
| | AHG85211.1 | LysR family transcriptional regulator protein of Neisseria bacilliformis ATCC BAA-1200 UniRef RepID=F2BEJ9_9NEIS. (306 aa) |
| | atpC | ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. (139 aa) |
| | atpD | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (457 aa) |
| | atpG | ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (288 aa) |
| | atpA | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (513 aa) |
| | atpH | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (177 aa) |
| | atpF | ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (156 aa) |
| | atpE | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (84 aa) |
| | atpB | F0F1-type ATP synthase, alpha subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (263 aa) |
| | AHG85229.1 | ABC transporter protein; ABC-type spermidine/putrescine transport systems, ATPase components COG3842; ABC transporter of Pasteurellaceae UniRef RepID=A6VQ20_ACTSZ; Belongs to the ABC transporter superfamily. (352 aa) |
| | AHG85231.1 | ABC transporter protein; ABC-type spermidine/putrescine transport systems, ATPase components COG3842; ABC transporter of Bacteria UniRef RepID=A6VQ22_ACTSZ; Belongs to the ABC transporter superfamily. (319 aa) |
| | mutL | DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (618 aa) |
| | F543_2750 | Biotin carboxylase COG0439; Phosphoribosylglycinamide synthetase of Bacteria UniRef RepID=A6VP22_ACTSZ. (392 aa) |
| | rplN | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (123 aa) |
| | rpsE | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (166 aa) |
| | rpmD | 50S ribosomal protein L30 PRK05611; 50S ribosomal protein L30 of Gammaproteobacteria UniRef RepID=RL30_BAUCH. (58 aa) |
| | rplO | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (203 aa) |
| | rpoA | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (329 aa) |
| | coaBC | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (403 aa) |
| | fbpC | Fe(3+) ions import ATP-binding protein FbpC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (349 aa) |
| | F543_3590 | Ribonucleotide-diphosphate reductase subunit alpha PRK09102; Ribonucleotide reductase, alpha subunit of root UniRef RepID=A5EVD2_DICNV. (555 aa) |
| | F543_3600 | Reductase; Ribonucleotide-diphosphate reductase subunit beta PRK13967; Ribonucleotide reductase beta chain of Environmental halophage 1 AAJ-2005 UniRef RepID=Q2XUY1_9VIRU. (325 aa) |
| | carA | Carbamoyl phosphate synthase small subunit PRK12564; Carbamoyl-phosphate synthase small chain of root UniRef RepID=CARA_POLSQ; Belongs to the CarA family. (379 aa) |
| | hslV | ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (173 aa) |
| | hslU | ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (438 aa) |
| | trmB | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (248 aa) |
| | ilvA | Threonine dehydratase biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (536 aa) |
| | F543_4700 | HTH transcription regulator PHA0738; ArsR family transcriptional regulator of Proteobacteria UniRef RepID=G4CS90_9NEIS. (95 aa) |
| | ribH | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. (153 aa) |
| | F543_4900 | Anthranilate synthase component II PRK06895; Anthranilate synthase component II of Pasteurellaceae UniRef RepID=B0BQ88_ACTPJ. (187 aa) |
| | clpX | ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (417 aa) |
| | F543_5060 | ModF protein; Molybdenum transport ATP-binding protein ModF PRK10938; ModF protein of Pasteurellaceae UniRef RepID=Q65UC0_MANSM; overlaps CDS with the same product name. (80 aa) |
| | modF | ModF protein; Molybdenum transport ATP-binding protein ModF PRK10938; ModF protein of Pasteurellaceae UniRef RepID=Q65UC0_MANSM; overlaps CDS with the same product name. (414 aa) |
| | rplA | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (229 aa) |
| | rplJ | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (163 aa) |
| | F543_5390 | GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily. (324 aa) |
| | rpoB | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1342 aa) |
| | rpoC | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1425 aa) |
| | F543_600 | DNA-directed RNA polymerase subunit beta' PRK00566; DNA-directed RNA polymerase subunit beta' of Bacteria UniRef RepID=RPOC_BLOPB. (168 aa) |
| | F543_6200 | Sn-glycerol-3-phosphate dehydrogenase subunit A PRK11101; Anaerobic glycerol-3-phosphate dehydrogenase subunit A of Bacteria UniRef RepID=GLPA_HAEIN; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (563 aa) |
| | mlaE | Probable ABC transporter permease protein HI_1086 of root UniRef RepID=Y1086_HAEIN. (258 aa) |
| | F543_6480 | Hypothetical protein; Predicted transcriptional regulator, BolA superfamily COG5007; Uncharacterized protein HI_1082 of Gammaproteobacteria UniRef RepID=Y1082_HAEIN; Belongs to the BolA/IbaG family. (87 aa) |
| | F543_6650 | CcmA protein; ABC-type multidrug transport system, ATPase component COG1131; CcmA protein of Enhydrobacter aerosaccus SK60 UniRef RepID=C8PWC8_9GAMM. (914 aa) |
| | F543_6660 | ABC-type multidrug transport system, permease component COG0842; ABC-type multidrug transport system, permease component of Bacteria UniRef RepID=B0BPC0_ACTPJ. (374 aa) |
| | lktB | Alpha-hemolysin translocation ATP-binding protein HlyB; Part of the ABC transporter complex LktBD involved in leukotoxin export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (Probable). (708 aa) |
| | F543_7060 | SOS-response transcriptional repressors (RecA-mediated autopeptidases) COG1974; SOS-response transcriptional repressors/RecA-mediated autopeptidase of Pasteurellaceae UniRef RepID=B0BTB1_ACTPJ. (148 aa) |
| | recB | Exodeoxyribonuclease V beta chain; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repai [...] (1200 aa) |
| | lptG | Lipopolysaccharide ABC transporter permease PRK15071; Lipopolysaccharide export system permease protein lptG of Gammaproteobacteria UniRef RepID=LPTG_HAEIN. (356 aa) |
| | lptF | Lipopolysaccharide ABC transporter permease LptF PRK15120; Lipopolysaccharide export system permease protein lptF of Pasteurellaceae UniRef RepID=LPTF_HAEIN. (366 aa) |
| | artQ | Arginine transporter permease subunit ArtQ PRK11123; Arginine ABC transporter permease protein ArtQ of Gammaproteobacteria UniRef RepID=ARTQ_HAEIN. (223 aa) |
| | artM | Arginine transporter permease subunit ArtM PRK11122; Arginine ABC transporter permease protein ArtM of Gammaproteobacteria UniRef RepID=ARTM_HAEIN. (227 aa) |
| | F543_7640 | DNA polymerase III subunit delta PRK05574; DNA polymerase III subunit delta of Gammaproteobacteria UniRef RepID=HOLA_HAEIN. (341 aa) |
| | F543_7940 | Manganese/iron transporter ATP-binding protein PRK15056; Probable iron transport system ATP-binding protein HI_0361 of Bacteria UniRef RepID=Y361_HAEIN. (253 aa) |
| | F543_7950 | Probable iron transport system membrane protein HI_0360 of Bacteria UniRef RepID=Y360_HAEIN. (107 aa) |
| | F543_7960 | Probable iron transport system membrane protein HI_0360 of Bacteria UniRef RepID=Y360_HAEIN. (179 aa) |
| | F543_7970 | Chelated iron transport system membrane protein yfeD of Proteobacteria UniRef RepID=D3V1I7_XENBS. (273 aa) |
| | recD | Exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (652 aa) |
| | F543_8270 | Anthranilate synthase component II PRK05670; Anthranilate synthase component II of Gammaproteobacteria UniRef RepID=TRPG_VIBPA. (196 aa) |
| | F543_8310 | Uncharacterized protein HI_0912 of Pasteurellaceae UniRef RepID=Y912_HAEIN. (252 aa) |
| | F543_8320 | Periplasmic oligopeptide-binding protein; Oligopeptide ABC transporter substrate-binding protein OppA PRK15104; Periplasmic oligopeptide-binding protein of Pasteurellaceae UniRef RepID=OPPA_HAEIN. (545 aa) |
| | lexA | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (210 aa) |
| | recQ | ATP-dependent DNA helicase RecQ PRK11057; ATP-dependent DNA helicase recQ of Bacteria UniRef RepID=RECQ_PASMU. (607 aa) |
| | eno | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (441 aa) |
| | F543_8810 | Recombination factor protein RarA PRK13342; Replication-associated recombination protein A of root UniRef RepID=RARA_HAEIN. (445 aa) |
| | dxr | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (396 aa) |
| | ruvC | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (197 aa) |
| | F543_9690 | UbiH protein; 2-octaprenyl-6-methoxyphenyl hydroxylase PRK05732; UbiH protein (2-octaprenyl-6-methoxyphenol) of Pasteurellaceae UniRef RepID=B0BT79_ACTPJ. (397 aa) |
| | hscB | Co-chaperone protein hscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. (173 aa) |
| | F543_9970 | Hypothetical protein; Exodeoxyribonuclease VII small subunit PRK00977; UPI00021AD122 cluster of unknown UniRef RepID=UPI00021AD122. (74 aa) |
