STRINGSTRING
AGY80800.1 AGY80800.1 AGY80801.1 AGY80801.1 AGY80802.1 AGY80802.1 AGY80803.1 AGY80803.1 AGY80804.1 AGY80804.1 AGY80805.1 AGY80805.1 rpoE rpoE AGY80970.1 AGY80970.1 AGY81007.1 AGY81007.1 AGY81008.1 AGY81008.1 AGY81009.1 AGY81009.1 AGY81168.1 AGY81168.1 AGY81211.1 AGY81211.1 AGY81255.1 AGY81255.1 AGY81256.1 AGY81256.1 prsA prsA AGY81301.1 AGY81301.1 AGY81302.1 AGY81302.1 AGY81303.1 AGY81303.1 AGY81304.1 AGY81304.1 AGY81305.1 AGY81305.1 spxA spxA mecA mecA AGY81339.1 AGY81339.1 AGY81341.1 AGY81341.1 ezrA ezrA AGY81440.1 AGY81440.1 AGY81448.1 AGY81448.1 AGY81467.1 AGY81467.1 AGY81572.1 AGY81572.1 AGY81576.1 AGY81576.1 AGY81577.1 AGY81577.1 AGY82788.1 AGY82788.1 AGY81585.1 AGY81585.1 AGY81586.1 AGY81586.1 AGY81593.1 AGY81593.1 AGY81595.1 AGY81595.1 recU recU gpsB gpsB AGY81620.1 AGY81620.1 AGY81631.1 AGY81631.1 AGY81752.1 AGY81752.1 AGY81987.1 AGY81987.1 AGY82041.1 AGY82041.1 AGY82079.1 AGY82079.1 AGY82080.1 AGY82080.1 AGY82087.1 AGY82087.1 AGY82153.1 AGY82153.1 AGY82172.1 AGY82172.1 AGY82389.1 AGY82389.1 AGY82512.1 AGY82512.1 AGY82513.1 AGY82513.1 AGY82718.1 AGY82718.1 AGY82719.1 AGY82719.1 AGY82721.1 AGY82721.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGY80800.1PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
AGY80801.1Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (614 aa)
AGY80802.1Regulator of WalKR; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
AGY80803.1Regulator of YycFG; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
AGY80804.1Metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
AGY80805.1Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
rpoEDNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. (204 aa)
AGY80970.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
AGY81007.1Topological determinant of cell division; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
AGY81008.1PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
AGY81009.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (592 aa)
AGY81168.1Dithiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
AGY81211.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
AGY81255.1PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
AGY81256.1Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
prsAPeptidylprolyl isomerase; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins. (337 aa)
AGY81301.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
AGY81302.1Histidine triad protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
AGY81303.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
AGY81304.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
AGY81305.1D-alanine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
spxAArsR family transcriptional regulator; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily. (132 aa)
mecACompetence negative regulator MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. (223 aa)
AGY81339.1Protein involved in establishment of DNA transport in competence; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
AGY81341.1Thiol management oxidoreductase component; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
ezrASelenide, water dikinase; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. (573 aa)
AGY81440.1DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
AGY81448.1Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
AGY81467.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0356 family. (71 aa)
AGY81572.1RibT protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
AGY81576.1PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
AGY81577.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)
AGY82788.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (355 aa)
AGY81585.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
AGY81586.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0302 family. (191 aa)
AGY81593.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
AGY81595.1DNA replication protein DnaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
recURecombinase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. (206 aa)
gpsBCell division protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. (109 aa)
AGY81620.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
AGY81631.1Metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
AGY81752.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
AGY81987.1Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
AGY82041.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
AGY82079.1Signal transduction histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
AGY82080.1PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
AGY82087.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
AGY82153.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family. (134 aa)
AGY82172.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
AGY82389.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family. (134 aa)
AGY82512.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
AGY82513.1Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
AGY82718.1Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
AGY82719.1PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
AGY82721.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
Your Current Organism:
Carnobacterium inhibens
NCBI taxonomy Id: 1266845
Other names: ATCC BAA-2557, C. inhibens subsp. gilichinskyi, Carnobacterium gilichinskyi, Carnobacterium inhibens subsp. gilichinskyi, Carnobacterium inhibens subsp. gilichinskyi Nicholson et al. 2015, Carnobacterium sp. WN1359, DSM 27470, strain WN1359
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