STRINGSTRING
WYH_00908 WYH_00908 pobB_1 pobB_1 pobA_2 pobA_2 bphE bphE nagAc nagAc hcaE hcaE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WYH_00908Cytochrome P450 130. (402 aa)
pobB_1Phenoxybenzoate dioxygenase subunit beta. (316 aa)
pobA_2Phenoxybenzoate dioxygenase subunit alpha. (391 aa)
bphEBiphenyl dioxygenase subunit beta. (171 aa)
nagAcNaphthalene 1,2-dioxygenase subunit alpha. (203 aa)
hcaE3-phenylpropionate/cinnamic acid dioxygenase subunit alpha. (214 aa)
Your Current Organism:
Altererythrobacter atlanticus
NCBI taxonomy Id: 1267766
Other names: A. atlanticus, Altererythrobacter atlanticus Wu et al. 2014, Altererythrobacter sp. 26DY36, CGMCC 1.12411, JCM 18865, strain 26DY36
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