5 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101353105	Metallophosphoesterase MPPED2. (294 aa)
	LOC101346445	Nuclear receptor-interacting protein 3. (240 aa)
	LOC101351616	E3 ubiquitin-protein ligase RNF182. (247 aa)
	LOC101345131	TBC1 domain family member 30 isoform X1. (947 aa)
	LOC101344405	cAMP-dependent protein kinase inhibitor; Belongs to the PKI family. (95 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101345131	LOC101346445	A0A2Y9RBR1	A0A2Y9D8W3	TBC1 domain family member 30 isoform X1.	Nuclear receptor-interacting protein 3.	0.671
LOC101345131	LOC101351616	A0A2Y9RBR1	A0A2Y9DYX6	TBC1 domain family member 30 isoform X1.	E3 ubiquitin-protein ligase RNF182.	0.574
LOC101346445	LOC101345131	A0A2Y9D8W3	A0A2Y9RBR1	Nuclear receptor-interacting protein 3.	TBC1 domain family member 30 isoform X1.	0.671
LOC101346445	LOC101351616	A0A2Y9D8W3	A0A2Y9DYX6	Nuclear receptor-interacting protein 3.	E3 ubiquitin-protein ligase RNF182.	0.567
LOC101351616	LOC101345131	A0A2Y9DYX6	A0A2Y9RBR1	E3 ubiquitin-protein ligase RNF182.	TBC1 domain family member 30 isoform X1.	0.574
LOC101351616	LOC101346445	A0A2Y9DYX6	A0A2Y9D8W3	E3 ubiquitin-protein ligase RNF182.	Nuclear receptor-interacting protein 3.	0.567