24 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101353092	Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (322 aa)
	LOC101353701	Nucleoporin Nup43. (380 aa)
	LOC101354044	ranBP2-like and GRIP domain-containing protein 4 isoform X1. (3043 aa)
	LOC101354240	Nucleoporin NDC1 isoform X1. (810 aa)
	LOC101343761	Nucleoprotein TPR isoform X1. (2436 aa)
	LOC101350450	Aladin. (543 aa)
	LOC101355951	Protein ELYS isoform X1. (2278 aa)
	LOC101346495	Nuclear pore complex protein Nup50. (468 aa)
	LOC101359128	Nucleoporin p54. (328 aa)
	LOC101344892	Nuclear pore complex protein Nup133 isoform X1. (1156 aa)
	LOC101348897	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (958 aa)
	LOC101344499	Nuclear pore complex protein Nup155 isoform X1. (1393 aa)
	LOC101344349	Nucleoporin SEH1 isoform X2; Belongs to the WD repeat SEC13 family. (421 aa)
	LOC101362026	Nuclear pore complex protein Nup88. (580 aa)
	LOC101348698	Nuclear pore complex protein Nup98-Nup96 isoform X1. (1881 aa)
	LOC101342921	Nuclear pore complex protein Nup214. (2102 aa)
	LOC101354487	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
	LOC101361171	Nucleoporin Nup37 isoform X1. (326 aa)
	LOC101353303	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (589 aa)
	LOC101347999	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (334 aa)
	LOC101361284	Nuclear pore complex protein Nup205. (1972 aa)
	LOC101359743	Nuclear pore complex protein Nup153. (1369 aa)
	LOC101357083	Nuclear pore complex protein Nup160 isoform X1. (1431 aa)
	LOC101350684	mRNA export factor isoform X1. (409 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101342921	LOC101343761	A0A2Y9QT26	A0A2Y9DF45	Nuclear pore complex protein Nup214.	Nucleoprotein TPR isoform X1.	0.920
LOC101342921	LOC101344349	A0A2Y9QT26	A0A2Y9E9Q9	Nuclear pore complex protein Nup214.	Nucleoporin SEH1 isoform X2; Belongs to the WD repeat SEC13 family.	0.995
LOC101342921	LOC101344499	A0A2Y9QT26	A0A2Y9E6J6	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup155 isoform X1.	0.993
LOC101342921	LOC101344892	A0A2Y9QT26	A0A2Y9DZ75	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup133 isoform X1.	0.988
LOC101342921	LOC101346495	A0A2Y9QT26	A0A2Y9DT14	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup50.	0.971
LOC101342921	LOC101347999	A0A2Y9QT26	A0A2Y9R3Q2	Nuclear pore complex protein Nup214.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.975
LOC101342921	LOC101348698	A0A2Y9QT26	A0A2Y9FYR8	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup98-Nup96 isoform X1.	0.998
LOC101342921	LOC101348897	A0A2Y9QT26	A0A2Y9E5B7	Nuclear pore complex protein Nup214.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.993
LOC101342921	LOC101350450	A0A2Y9QT26	A0A2Y9DH42	Nuclear pore complex protein Nup214.	Aladin.	0.953
LOC101342921	LOC101350684	A0A2Y9QT26	A0A2Y9S313	Nuclear pore complex protein Nup214.	mRNA export factor isoform X1.	0.992
LOC101342921	LOC101353092	A0A2Y9QT26	A0A2Y9D5W7	Nuclear pore complex protein Nup214.	Protein SEC13 homolog; Belongs to the WD repeat SEC13 family.	0.972
LOC101342921	LOC101353303	A0A2Y9QT26	A0A2Y9R0R9	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.994
LOC101342921	LOC101353701	A0A2Y9QT26	A0A2Y9D6U4	Nuclear pore complex protein Nup214.	Nucleoporin Nup43.	0.982
LOC101342921	LOC101354044	A0A2Y9QT26	A0A2Y9D7N9	Nuclear pore complex protein Nup214.	ranBP2-like and GRIP domain-containing protein 4 isoform X1.	0.999
LOC101342921	LOC101354240	A0A2Y9QT26	A0A2Y9DC07	Nuclear pore complex protein Nup214.	Nucleoporin NDC1 isoform X1.	0.966
LOC101342921	LOC101354487	A0A2Y9QT26	A0A2Y9QTP7	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.994
LOC101342921	LOC101355951	A0A2Y9QT26	A0A2Y9DJU1	Nuclear pore complex protein Nup214.	Protein ELYS isoform X1.	0.826
LOC101342921	LOC101357083	A0A2Y9QT26	A0A2Y9RSR4	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup160 isoform X1.	0.881
LOC101342921	LOC101359128	A0A2Y9QT26	A0A2Y9DXG0	Nuclear pore complex protein Nup214.	Nucleoporin p54.	0.978
LOC101342921	LOC101359743	A0A2Y9QT26	A0A2Y9RMS5	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup153.	0.985