12 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101354044	ranBP2-like and GRIP domain-containing protein 4 isoform X1. (3043 aa)
	LOC101354240	Nucleoporin NDC1 isoform X1. (810 aa)
	LOC101350450	Aladin. (543 aa)
	LOC101359128	Nucleoporin p54. (328 aa)
	LOC101344499	Nuclear pore complex protein Nup155 isoform X1. (1393 aa)
	LOC101362026	Nuclear pore complex protein Nup88. (580 aa)
	LOC101348698	Nuclear pore complex protein Nup98-Nup96 isoform X1. (1881 aa)
	LOC101342921	Nuclear pore complex protein Nup214. (2102 aa)
	LOC101354487	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
	LOC101347999	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (334 aa)
	LOC101361284	Nuclear pore complex protein Nup205. (1972 aa)
	LOC101350684	mRNA export factor isoform X1. (409 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101342921	LOC101344499	A0A2Y9QT26	A0A2Y9E6J6	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup155 isoform X1.	0.993
LOC101342921	LOC101347999	A0A2Y9QT26	A0A2Y9R3Q2	Nuclear pore complex protein Nup214.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.975
LOC101342921	LOC101348698	A0A2Y9QT26	A0A2Y9FYR8	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup98-Nup96 isoform X1.	0.998
LOC101342921	LOC101350450	A0A2Y9QT26	A0A2Y9DH42	Nuclear pore complex protein Nup214.	Aladin.	0.953
LOC101342921	LOC101350684	A0A2Y9QT26	A0A2Y9S313	Nuclear pore complex protein Nup214.	mRNA export factor isoform X1.	0.992
LOC101342921	LOC101354044	A0A2Y9QT26	A0A2Y9D7N9	Nuclear pore complex protein Nup214.	ranBP2-like and GRIP domain-containing protein 4 isoform X1.	0.999
LOC101342921	LOC101354240	A0A2Y9QT26	A0A2Y9DC07	Nuclear pore complex protein Nup214.	Nucleoporin NDC1 isoform X1.	0.966
LOC101342921	LOC101354487	A0A2Y9QT26	A0A2Y9QTP7	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.994
LOC101342921	LOC101359128	A0A2Y9QT26	A0A2Y9DXG0	Nuclear pore complex protein Nup214.	Nucleoporin p54.	0.978
LOC101342921	LOC101361284	A0A2Y9QT26	A0A2Y9RER2	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup205.	0.993
LOC101342921	LOC101362026	A0A2Y9QT26	A0A2Y9FWP3	Nuclear pore complex protein Nup214.	Nuclear pore complex protein Nup88.	0.999
LOC101344499	LOC101342921	A0A2Y9E6J6	A0A2Y9QT26	Nuclear pore complex protein Nup155 isoform X1.	Nuclear pore complex protein Nup214.	0.993
LOC101344499	LOC101347999	A0A2Y9E6J6	A0A2Y9R3Q2	Nuclear pore complex protein Nup155 isoform X1.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.999
LOC101344499	LOC101348698	A0A2Y9E6J6	A0A2Y9FYR8	Nuclear pore complex protein Nup155 isoform X1.	Nuclear pore complex protein Nup98-Nup96 isoform X1.	0.999
LOC101344499	LOC101350450	A0A2Y9E6J6	A0A2Y9DH42	Nuclear pore complex protein Nup155 isoform X1.	Aladin.	0.991
LOC101344499	LOC101350684	A0A2Y9E6J6	A0A2Y9S313	Nuclear pore complex protein Nup155 isoform X1.	mRNA export factor isoform X1.	0.971
LOC101344499	LOC101354044	A0A2Y9E6J6	A0A2Y9D7N9	Nuclear pore complex protein Nup155 isoform X1.	ranBP2-like and GRIP domain-containing protein 4 isoform X1.	0.999
LOC101344499	LOC101354240	A0A2Y9E6J6	A0A2Y9DC07	Nuclear pore complex protein Nup155 isoform X1.	Nucleoporin NDC1 isoform X1.	0.991
LOC101344499	LOC101354487	A0A2Y9E6J6	A0A2Y9QTP7	Nuclear pore complex protein Nup155 isoform X1.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.999
LOC101344499	LOC101359128	A0A2Y9E6J6	A0A2Y9DXG0	Nuclear pore complex protein Nup155 isoform X1.	Nucleoporin p54.	0.996