10 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101358979	Protein RRP5 homolog. (1872 aa)
	LOC101347815	DDB1- and CUL4-associated factor 13. (445 aa)
	LOC101353879	rRNA-processing protein FCF1 homolog. (198 aa)
	LOC101359694	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
	LOC101346159	Nucleolar protein 14. (854 aa)
	LOC101340741	Something about silencing protein 10. (478 aa)
	LOC101346003	Nucleolar complex protein 4 homolog. (516 aa)
	LOC101345741	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (381 aa)
	LOC101358623	Ribosomal RNA small subunit methyltransferase NEP1. (244 aa)
	LOC101351125	WD repeat-containing protein 46 isoform X1. (625 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101340741	LOC101345741	A0A2Y9DZ79	A0A2Y9E1M1	Something about silencing protein 10.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
LOC101340741	LOC101346003	A0A2Y9DZ79	A0A2Y9E1C9	Something about silencing protein 10.	Nucleolar complex protein 4 homolog.	0.998
LOC101340741	LOC101346159	A0A2Y9DZ79	A0A2Y9DY52	Something about silencing protein 10.	Nucleolar protein 14.	0.999
LOC101340741	LOC101347815	A0A2Y9DZ79	A0A2Y9D9X6	Something about silencing protein 10.	DDB1- and CUL4-associated factor 13.	0.996
LOC101340741	LOC101351125	A0A2Y9DZ79	A0A2Y9QMY0	Something about silencing protein 10.	WD repeat-containing protein 46 isoform X1.	0.999
LOC101340741	LOC101353879	A0A2Y9DZ79	A0A2Y9DB72	Something about silencing protein 10.	rRNA-processing protein FCF1 homolog.	0.997
LOC101340741	LOC101358623	A0A2Y9DZ79	A0A2Y9E577	Something about silencing protein 10.	Ribosomal RNA small subunit methyltransferase NEP1.	0.992
LOC101340741	LOC101358979	A0A2Y9DZ79	A0A2Y9D902	Something about silencing protein 10.	Protein RRP5 homolog.	0.992
LOC101340741	LOC101359694	A0A2Y9DZ79	A0A2Y9DCE5	Something about silencing protein 10.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
LOC101345741	LOC101340741	A0A2Y9E1M1	A0A2Y9DZ79	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Something about silencing protein 10.	0.999
LOC101345741	LOC101346003	A0A2Y9E1M1	A0A2Y9E1C9	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Nucleolar complex protein 4 homolog.	0.998
LOC101345741	LOC101346159	A0A2Y9E1M1	A0A2Y9DY52	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Nucleolar protein 14.	0.999
LOC101345741	LOC101347815	A0A2Y9E1M1	A0A2Y9D9X6	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	DDB1- and CUL4-associated factor 13.	0.998
LOC101345741	LOC101351125	A0A2Y9E1M1	A0A2Y9QMY0	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	WD repeat-containing protein 46 isoform X1.	0.999
LOC101345741	LOC101353879	A0A2Y9E1M1	A0A2Y9DB72	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	rRNA-processing protein FCF1 homolog.	0.998
LOC101345741	LOC101358623	A0A2Y9E1M1	A0A2Y9E577	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Ribosomal RNA small subunit methyltransferase NEP1.	0.999
LOC101345741	LOC101358979	A0A2Y9E1M1	A0A2Y9D902	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Protein RRP5 homolog.	0.999
LOC101345741	LOC101359694	A0A2Y9E1M1	A0A2Y9DCE5	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
LOC101346003	LOC101340741	A0A2Y9E1C9	A0A2Y9DZ79	Nucleolar complex protein 4 homolog.	Something about silencing protein 10.	0.998
LOC101346003	LOC101345741	A0A2Y9E1C9	A0A2Y9E1M1	Nucleolar complex protein 4 homolog.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.998