6 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101345820	Inner centromere protein. (922 aa)
	LOC101353569	Testis-expressed protein 11. (951 aa)
	LOC101342644	Synaptonemal complex central element protein 2. (183 aa)
	LOC101348882	Testis-expressed protein 12. (123 aa)
	LOC101353757	Synaptonemal complex central element protein 3. (88 aa)
	LOC101345179	Protein SIX6OS1. (584 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101342644	LOC101345179	A0A2Y9EA25	A0A2Y9DAD1	Synaptonemal complex central element protein 2.	Protein SIX6OS1.	0.588
LOC101342644	LOC101353757	A0A2Y9EA25	A0A2Y9DT32	Synaptonemal complex central element protein 2.	Synaptonemal complex central element protein 3.	0.853
LOC101345179	LOC101342644	A0A2Y9DAD1	A0A2Y9EA25	Protein SIX6OS1.	Synaptonemal complex central element protein 2.	0.588
LOC101345179	LOC101353757	A0A2Y9DAD1	A0A2Y9DT32	Protein SIX6OS1.	Synaptonemal complex central element protein 3.	0.551
LOC101353757	LOC101342644	A0A2Y9DT32	A0A2Y9EA25	Synaptonemal complex central element protein 3.	Synaptonemal complex central element protein 2.	0.853
LOC101353757	LOC101345179	A0A2Y9DT32	A0A2Y9DAD1	Synaptonemal complex central element protein 3.	Protein SIX6OS1.	0.551