STRINGSTRING
LOC101351075 LOC101351075 LOC101342293 LOC101342293 LOC101343480 LOC101343480 LOC101357184 LOC101357184 LOC101343406 LOC101343406 LOC101352433 LOC101352433 LOC101355165 LOC101355165 LOC101345610 LOC101345610 LOC101360741 LOC101360741 LOC101359180 LOC101359180 LOC101359798 LOC101359798 LOC101355083 LOC101355083 LOC101353903 LOC101353903 LOC101348422 LOC101348422 LOC101343944 LOC101343944 LOC101345791 LOC101345791 LOC101355521 LOC101355521 LOC101342676 LOC101342676 LOC101351767 LOC101351767 LOC101351592 LOC101351592 LOC101343781 LOC101343781 LOC101348359 LOC101348359 LOC101348436 LOC101348436 LOC101346748 LOC101346748 LOC101359982 LOC101359982 LOC101344048 LOC101344048 LOC101351343 LOC101351343 LOC101341086 LOC101341086 LOC101359823 LOC101359823 LOC101357147 LOC101357147 LOC101355987 LOC101355987 LOC101356824 LOC101356824 LOC101358256 LOC101358256 LOC101341603 LOC101341603 LOC101356911 LOC101356911 LOC101341949 LOC101341949 LOC101361222 LOC101361222 LOC101344923 LOC101344923 LOC101346548 LOC101346548 LOC105756220 LOC105756220 LOC105756215 LOC105756215 LOC101359198 LOC101359198 LOC101356088 LOC101356088 LOC101359539 LOC101359539 LOC101358729 LOC101358729 LOC101342584 LOC101342584 LOC105756128 LOC105756128 LOC111820707 LOC111820707 LOC101344388 LOC101344388 LOC101350643 LOC101350643 LOC101355269 LOC101355269 LOC101350352 LOC101350352 LOC111821564 LOC111821564 LOC101351624 LOC101351624 LOC101349220 LOC101349220 LOC101357094 LOC101357094 LOC101360444 LOC101360444 LOC101356166 LOC101356166
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101351075ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1368 aa)
LOC101342293Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (359 aa)
LOC101343480Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (473 aa)
LOC10135718460S ribosomal protein L30. (115 aa)
LOC10134340640S ribosomal protein S29. (56 aa)
LOC10135243360S ribosomal protein L26-like 1. (145 aa)
LOC101355165Translation initiation factor eIF-2B subunit gamma. (451 aa)
LOC101345610RWD domain-containing protein 1 isoform X1. (243 aa)
LOC101360741Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (352 aa)
LOC10135918060S ribosomal protein L35a. (110 aa)
LOC101359798Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (564 aa)
LOC101355083Eukaryotic translation initiation factor 4B isoform X1. (607 aa)
LOC101353903Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (1375 aa)
LOC10134842260S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
LOC101343944Eukaryotic translation initiation factor 2D. (585 aa)
LOC10134579160S ribosomal protein L26. (145 aa)
LOC101355521Eukaryotic translation initiation factor 5. (430 aa)
LOC10134267640S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
LOC101351767Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
LOC10135159260S ribosomal protein L24. (157 aa)
LOC101343781Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (320 aa)
LOC10134835960S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (287 aa)
LOC10134843640S ribosomal protein S28. (69 aa)
LOC101346748Developmentally-regulated GTP-binding protein 1. (367 aa)
LOC10135998260S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (318 aa)
LOC101344048Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (255 aa)
LOC101351343Developmentally-regulated GTP-binding protein 2 isoform X1. (364 aa)
LOC101341086Eukaryotic translation initiation factor 4H isoform X1. (248 aa)
LOC10135982360S ribosomal protein L18. (188 aa)
LOC101357147Eukaryotic translation initiation factor 2 subunit 3 isoform X1. (472 aa)
LOC10135598760S ribosomal protein L22-like 1. (122 aa)
LOC10135682460S ribosomal protein L9. (192 aa)
LOC101358256Density-regulated protein; Belongs to the DENR family. (198 aa)
LOC101341603Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (810 aa)
LOC101356911Zinc finger CCCH domain-containing protein 15. (426 aa)
LOC10134194960S ribosomal protein L8. (257 aa)
LOC10136122260S ribosomal protein L31. (125 aa)
LOC10134492360S acidic ribosomal protein P2 isoform X1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
LOC10134654860S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (184 aa)
LOC10575622060S acidic ribosomal protein P1-like. (135 aa)
LOC105756215LOW QUALITY PROTEIN: 40S ribosomal protein SA-like. (263 aa)
LOC101359198Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
LOC101356088RWD domain-containing protein 4 isoform X1. (188 aa)
LOC101359539MIF4G domain-containing protein isoform X1. (261 aa)
LOC101358729Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (325 aa)
LOC101342584Eukaryotic translation initiation factor 3 subunit D. (424 aa)
LOC10575612860S ribosomal protein L30-like. (112 aa)
LOC111820707LOW QUALITY PROTEIN: 60S ribosomal protein L31. (128 aa)
LOC101344388Malignant T-cell-amplified sequence 1 isoform X1. (224 aa)
LOC101350643Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (379 aa)
LOC10135526960S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
LOC10135035260S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (159 aa)
LOC11182156460S ribosomal protein L30-like. (145 aa)
LOC10135162460S ribosomal protein L22 isoform X1. (145 aa)
LOC101349220RNA-binding protein 4 isoform X1. (365 aa)
LOC101357094Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (399 aa)
LOC101360444Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (843 aa)
LOC101356166Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (220 aa)
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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