12 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101354492	AFG1-like ATPase. (480 aa)
	LOC101346028	Cytochrome c oxidase subunit 7A2, mitochondrial. (83 aa)
	LOC101357118	Cytochrome c oxidase subunit 5A, mitochondrial. (130 aa)
	LOC101345533	Cytochrome c oxidase subunit 7C, mitochondrial. (63 aa)
	LOC101358698	Cytochrome c oxidase subunit 6A, mitochondrial. (97 aa)
	LOC101351241	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial. (169 aa)
	LOC101346963	Cytochrome c oxidase subunit 4 isoform 2, mitochondrial. (170 aa)
	LOC101355564	Cytochrome c oxidase subunit 7A-related protein, mitochondrial. (113 aa)
	LOC101343047	Cytochrome c oxidase subunit 5B, mitochondrial. (129 aa)
	LOC101354643	Cytochrome c oxidase subunit 6C. (75 aa)
	LOC111821885	Cytochrome c oxidase subunit 8A, mitochondrial. (69 aa)
	LOC101340894	Uncharacterized protein C1orf198 homolog. (316 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101340894	LOC101345533	A0A2Y9DDY5	A0A2Y9DHX5	Uncharacterized protein C1orf198 homolog.	Cytochrome c oxidase subunit 7C, mitochondrial.	0.994
LOC101340894	LOC101346028	A0A2Y9DDY5	A0A2Y9QNX3	Uncharacterized protein C1orf198 homolog.	Cytochrome c oxidase subunit 7A2, mitochondrial.	0.802
LOC101340894	LOC101346963	A0A2Y9DDY5	A0A2Y9D9L8	Uncharacterized protein C1orf198 homolog.	Cytochrome c oxidase subunit 4 isoform 2, mitochondrial.	0.956
LOC101340894	LOC101351241	A0A2Y9DDY5	A0A2Y9DN70	Uncharacterized protein C1orf198 homolog.	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.	0.956
LOC101340894	LOC101354643	A0A2Y9DDY5	A0A2Y9DA11	Uncharacterized protein C1orf198 homolog.	Cytochrome c oxidase subunit 6C.	0.941
LOC101340894	LOC101355564	A0A2Y9DDY5	A0A2Y9D7Y9	Uncharacterized protein C1orf198 homolog.	Cytochrome c oxidase subunit 7A-related protein, mitochondrial.	0.761
LOC101340894	LOC101357118	A0A2Y9DDY5	A0A2Y9R1S0	Uncharacterized protein C1orf198 homolog.	Cytochrome c oxidase subunit 5A, mitochondrial.	0.994
LOC101340894	LOC101358698	A0A2Y9DDY5	A0A2Y9E4F4	Uncharacterized protein C1orf198 homolog.	Cytochrome c oxidase subunit 6A, mitochondrial.	0.909
LOC101340894	LOC111821885	A0A2Y9DDY5	A0A2Y9RQ53	Uncharacterized protein C1orf198 homolog.	Cytochrome c oxidase subunit 8A, mitochondrial.	0.833
LOC101343047	LOC101345533	A0A2Y9FZY1	A0A2Y9DHX5	Cytochrome c oxidase subunit 5B, mitochondrial.	Cytochrome c oxidase subunit 7C, mitochondrial.	0.999
LOC101343047	LOC101346028	A0A2Y9FZY1	A0A2Y9QNX3	Cytochrome c oxidase subunit 5B, mitochondrial.	Cytochrome c oxidase subunit 7A2, mitochondrial.	0.977
LOC101343047	LOC101346963	A0A2Y9FZY1	A0A2Y9D9L8	Cytochrome c oxidase subunit 5B, mitochondrial.	Cytochrome c oxidase subunit 4 isoform 2, mitochondrial.	0.992
LOC101343047	LOC101351241	A0A2Y9FZY1	A0A2Y9DN70	Cytochrome c oxidase subunit 5B, mitochondrial.	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.	0.997
LOC101343047	LOC101354643	A0A2Y9FZY1	A0A2Y9DA11	Cytochrome c oxidase subunit 5B, mitochondrial.	Cytochrome c oxidase subunit 6C.	0.998
LOC101343047	LOC101355564	A0A2Y9FZY1	A0A2Y9D7Y9	Cytochrome c oxidase subunit 5B, mitochondrial.	Cytochrome c oxidase subunit 7A-related protein, mitochondrial.	0.916
LOC101343047	LOC101357118	A0A2Y9FZY1	A0A2Y9R1S0	Cytochrome c oxidase subunit 5B, mitochondrial.	Cytochrome c oxidase subunit 5A, mitochondrial.	0.999
LOC101343047	LOC101358698	A0A2Y9FZY1	A0A2Y9E4F4	Cytochrome c oxidase subunit 5B, mitochondrial.	Cytochrome c oxidase subunit 6A, mitochondrial.	0.996
LOC101343047	LOC111821885	A0A2Y9FZY1	A0A2Y9RQ53	Cytochrome c oxidase subunit 5B, mitochondrial.	Cytochrome c oxidase subunit 8A, mitochondrial.	0.985
LOC101345533	LOC101340894	A0A2Y9DHX5	A0A2Y9DDY5	Cytochrome c oxidase subunit 7C, mitochondrial.	Uncharacterized protein C1orf198 homolog.	0.994
LOC101345533	LOC101343047	A0A2Y9DHX5	A0A2Y9FZY1	Cytochrome c oxidase subunit 7C, mitochondrial.	Cytochrome c oxidase subunit 5B, mitochondrial.	0.999