18 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101347243	Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1. (217 aa)
	LOC101341889	AP-1 complex subunit gamma. (841 aa)
	LOC101350432	Vacuolar protein sorting-associated protein 52 homolog isoform X3. (727 aa)
	LOC101360880	Rabenosyn-5. (782 aa)
	LOC101342999	Rabankyrin-5 isoform X1. (1170 aa)
	LOC101340332	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (453 aa)
	LOC101348304	Sortilin. (769 aa)
	LOC101359408	AP-1 complex subunit gamma. (827 aa)
	LOC101344056	Lysosome-associated membrane glycoprotein 1 isoform X1. (416 aa)
	LOC101351701	Coiled-coil domain-containing protein 91 isoform X1. (442 aa)
	LOC111820952	AP-3 complex subunit delta-1-like. (323 aa)
	LOC101360706	Battenin. (438 aa)
	LOC101352558	cyclin-G-associated kinase. (1324 aa)
	LOC101361358	RING finger protein 215. (282 aa)
	LOC101358229	AP-3 complex subunit sigma-1. (193 aa)
	LOC101357687	Vesicle transport through interaction with t-SNAREs homolog 1B isoform X1. (232 aa)
	LOC101348224	Vacuolar protein sorting-associated protein 54 isoform X1. (978 aa)
	LOC101342845	AP-3 complex subunit delta-1. (1201 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101340332	LOC101341889	A0A2Y9E5W3	A0A2Y9QI66	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.868
LOC101340332	LOC101342845	A0A2Y9E5W3	A0A2Y9R6M1	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit delta-1.	0.734
LOC101340332	LOC101348304	A0A2Y9E5W3	A0A2Y9RWI3	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Sortilin.	0.414
LOC101340332	LOC101352558	A0A2Y9E5W3	A0A2Y9DZW8	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	cyclin-G-associated kinase.	0.951
LOC101340332	LOC101358229	A0A2Y9E5W3	A0A2Y9DLW6	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit sigma-1.	0.665
LOC101340332	LOC101359408	A0A2Y9E5W3	A0A2Y9RSW2	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.868
LOC101340332	LOC111820952	A0A2Y9E5W3	A0A2Y9RAM1	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit delta-1-like.	0.734
LOC101341889	LOC101340332	A0A2Y9QI66	A0A2Y9E5W3	AP-1 complex subunit gamma.	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.868
LOC101341889	LOC101342845	A0A2Y9QI66	A0A2Y9R6M1	AP-1 complex subunit gamma.	AP-3 complex subunit delta-1.	0.483
LOC101341889	LOC101348304	A0A2Y9QI66	A0A2Y9RWI3	AP-1 complex subunit gamma.	Sortilin.	0.471
LOC101341889	LOC101352558	A0A2Y9QI66	A0A2Y9DZW8	AP-1 complex subunit gamma.	cyclin-G-associated kinase.	0.962
LOC101341889	LOC101358229	A0A2Y9QI66	A0A2Y9DLW6	AP-1 complex subunit gamma.	AP-3 complex subunit sigma-1.	0.793
LOC101341889	LOC101359408	A0A2Y9QI66	A0A2Y9RSW2	AP-1 complex subunit gamma.	AP-1 complex subunit gamma.	0.903
LOC101341889	LOC111820952	A0A2Y9QI66	A0A2Y9RAM1	AP-1 complex subunit gamma.	AP-3 complex subunit delta-1-like.	0.483
LOC101342845	LOC101340332	A0A2Y9R6M1	A0A2Y9E5W3	AP-3 complex subunit delta-1.	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.734
LOC101342845	LOC101341889	A0A2Y9R6M1	A0A2Y9QI66	AP-3 complex subunit delta-1.	AP-1 complex subunit gamma.	0.483
LOC101342845	LOC101352558	A0A2Y9R6M1	A0A2Y9DZW8	AP-3 complex subunit delta-1.	cyclin-G-associated kinase.	0.963
LOC101342845	LOC101358229	A0A2Y9R6M1	A0A2Y9DLW6	AP-3 complex subunit delta-1.	AP-3 complex subunit sigma-1.	0.979
LOC101342845	LOC101359408	A0A2Y9R6M1	A0A2Y9RSW2	AP-3 complex subunit delta-1.	AP-1 complex subunit gamma.	0.483
LOC101342845	LOC111820952	A0A2Y9R6M1	A0A2Y9RAM1	AP-3 complex subunit delta-1.	AP-3 complex subunit delta-1-like.	0.905