STRINGSTRING
LOC101349587 LOC101349587 LOC101348159 LOC101348159 LOC101342175 LOC101342175 LOC101348807 LOC101348807 LOC101345069 LOC101345069 LOC101358979 LOC101358979 LOC101347815 LOC101347815 LOC101353879 LOC101353879 LOC101348659 LOC101348659 LOC101359170 LOC101359170 LOC101345186 LOC101345186 LOC101359694 LOC101359694 LOC101340891 LOC101340891 LOC101349180 LOC101349180 LOC101356292 LOC101356292 LOC101341080 LOC101341080 LOC101355441 LOC101355441 LOC101348098 LOC101348098 LOC101349118 LOC101349118 LOC101347843 LOC101347843 LOC101349373 LOC101349373 LOC101343508 LOC101343508 LOC101361517 LOC101361517 LOC101360321 LOC101360321 LOC101346733 LOC101346733 LOC101355092 LOC101355092 LOC101340701 LOC101340701 LOC101361084 LOC101361084 LOC101348080 LOC101348080 LOC101361249 LOC101361249 LOC101355509 LOC101355509 LOC101344456 LOC101344456 LOC101351125 LOC101351125 LOC101352427 LOC101352427 LOC101353994 LOC101353994 LOC111819696 LOC111819696 LOC101358916 LOC101358916 LOC101357619 LOC101357619 LOC101352332 LOC101352332 LOC101358620 LOC101358620 LOC101348119 LOC101348119 LOC101351423 LOC101351423 LOC101357121 LOC101357121 LOC101349428 LOC101349428 LOC101341137 LOC101341137 LOC101355402 LOC101355402 LOC101354123 LOC101354123 LOC101358623 LOC101358623 LOC101342529 LOC101342529 LOC101345741 LOC101345741 LOC101346003 LOC101346003 LOC101348793 LOC101348793 LOC101349144 LOC101349144 LOC101359912 LOC101359912 LOC101361205 LOC101361205 LOC101340741 LOC101340741 LOC101346159 LOC101346159 LOC101359641 LOC101359641 LOC101359637 LOC101359637 LOC101361106 LOC101361106 LOC101351422 LOC101351422 LOC101359149 LOC101359149 LOC101350347 LOC101350347 LOC101357166 LOC101357166 LOC101347378 LOC101347378 LOC101346595 LOC101346595 LOC101351097 LOC101351097 LOC101347105 LOC101347105 LOC101355631 LOC101355631 LOC101351261 LOC101351261 LOC101356146 LOC101356146 LOC101340740 LOC101340740 LOC101360484 LOC101360484
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101349587Protein LTV1 homolog. (477 aa)
LOC101348159Transducin beta-like protein 3. (831 aa)
LOC101342175Ribosomal RNA-processing protein 7 homolog A. (279 aa)
LOC101348807U3 small nucleolar RNA-interacting protein 2. (518 aa)
LOC101345069Ribosome production factor 1. (348 aa)
LOC101358979Protein RRP5 homolog. (1872 aa)
LOC101347815DDB1- and CUL4-associated factor 13. (445 aa)
LOC101353879rRNA-processing protein FCF1 homolog. (198 aa)
LOC101348659U3 small nucleolar RNA-associated protein 4 homolog isoform X1. (686 aa)
LOC101359170rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. (325 aa)
LOC101345186Probable rRNA-processing protein EBP2. (305 aa)
LOC101359694U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
LOC101340891Nucleolar protein 6. (1141 aa)
LOC101349180U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (676 aa)
LOC101356292HEAT repeat-containing protein 1 isoform X1. (2142 aa)
LOC101341080Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (588 aa)
LOC101355441Protein KRI1 homolog. (703 aa)
LOC101348098Nucleolar protein 58 isoform X1. (533 aa)
LOC101349118Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)
LOC101347843U3 small nucleolar RNA-associated protein 18 homolog. (555 aa)
LOC101349373Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
LOC101343508WD repeat-containing protein 36. (895 aa)
LOC101361517X-ray repair cross-complementing protein 5 isoform X1. (742 aa)
LOC101360321pre-rRNA-processing protein TSR1 homolog isoform X1. (804 aa)
LOC101346733DNA-dependent protein kinase catalytic subunit isoform X1; Belongs to the PI3/PI4-kinase family. (4134 aa)
LOC101355092Serine/threonine-protein kinase RIO2. (552 aa)
LOC101340701U3 small nucleolar ribonucleoprotein protein IMP3. (233 aa)
LOC101361084Ribosome biogenesis protein NSA2 homolog. (260 aa)
LOC101348080Nucleolar protein 10 isoform X1. (687 aa)
LOC101361249rRNA-processing protein UTP23 homolog. (249 aa)
LOC10135550940S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
LOC101344456Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (365 aa)
LOC101351125WD repeat-containing protein 46 isoform X1. (625 aa)
LOC101352427Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...] (245 aa)
LOC101353994pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (837 aa)
LOC111819696U3 small nucleolar ribonucleoprotein protein IMP4-like. (209 aa)
LOC101358916Small subunit processome component 20 homolog isoform X1. (2807 aa)
LOC101357619Ribosomal L1 domain-containing protein 1. (487 aa)
LOC101352332Ribosome biogenesis protein BMS1 homolog. (1287 aa)
LOC101358620Hormonally up-regulated neu tumor-associated kinase. (709 aa)
LOC101348119Zinc finger protein 622 isoform X1. (478 aa)
LOC101351423U3 small nucleolar RNA-associated protein 14 homolog A. (781 aa)
LOC101357121RRP15-like protein. (283 aa)
LOC101349428Nucleolar protein 9. (635 aa)
LOC101341137Neuroguidin. (315 aa)
LOC101355402Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (563 aa)
LOC101354123U3 small nucleolar ribonucleoprotein protein IMP4. (291 aa)
LOC101358623Ribosomal RNA small subunit methyltransferase NEP1. (244 aa)
LOC101342529U3 small nucleolar RNA-associated protein 6 homolog. (598 aa)
LOC101345741KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (381 aa)
LOC101346003Nucleolar complex protein 4 homolog. (516 aa)
LOC101348793Protein FAM207A isoform X1. (219 aa)
LOC10134914460S ribosome subunit biogenesis protein NIP7 homolog. (282 aa)
LOC101359912Protein MAK16 homolog; Belongs to the MAK16 family. (293 aa)
LOC101361205WD repeat-containing protein 74. (385 aa)
LOC101340741Something about silencing protein 10. (478 aa)
LOC101346159Nucleolar protein 14. (854 aa)
LOC101359641Ribosomal biogenesis protein LAS1L isoform X1. (710 aa)
LOC101359637WD repeat-containing protein 3. (943 aa)
LOC101361106Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC101351422Bystin. (437 aa)
LOC101359149Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses. (514 aa)
LOC101350347Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (737 aa)
LOC101357166rRNA 2'-O-methyltransferase fibrillarin. (317 aa)
LOC101347378Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5599 aa)
LOC101346595Periodic tryptophan protein 2 homolog. (650 aa)
LOC101351097Ribosomal RNA processing protein 1 homolog B. (760 aa)
LOC101347105Ribosomal RNA processing protein 1 homolog A isoform X1. (466 aa)
LOC101355631Serum response factor-binding protein 1 isoform X1. (428 aa)
LOC101351261U3 small nucleolar RNA-associated protein 14 homolog A-like isoform X1. (766 aa)
LOC101356146Nucleolar complex protein 2 homolog isoform X1. (703 aa)
LOC101340740Nucleolar protein 56 isoform X1. (613 aa)
LOC101360484Digestive organ expansion factor homolog isoform X1. (802 aa)
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.