(5 nodes) Mitochondrion targeting sequence binding network (Trichechus manatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101343948	Mitochondrial import inner membrane translocase subunit Tim22. (194 aa)
	LOC101340880	TOMM20-like protein 1. (150 aa)
	LOC101347642	Mitochondrial import receptor subunit TOM40B. (308 aa)
	LOC101359699	Mitochondrial import receptor subunit TOM20 homolog. (145 aa)
	LOC101341330	Mitochondrial import receptor subunit TOM70. (609 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101340880	LOC101341330	A0A2Y9DAW2	A0A2Y9DNY1	TOMM20-like protein 1.	Mitochondrial import receptor subunit TOM70.	0.923
LOC101340880	LOC101347642	A0A2Y9DAW2	A0A2Y9EAB3	TOMM20-like protein 1.	Mitochondrial import receptor subunit TOM40B.	0.849
LOC101341330	LOC101340880	A0A2Y9DNY1	A0A2Y9DAW2	Mitochondrial import receptor subunit TOM70.	TOMM20-like protein 1.	0.923
LOC101341330	LOC101343948	A0A2Y9DNY1	A0A2Y9DKL1	Mitochondrial import receptor subunit TOM70.	Mitochondrial import inner membrane translocase subunit Tim22.	0.531
LOC101341330	LOC101347642	A0A2Y9DNY1	A0A2Y9EAB3	Mitochondrial import receptor subunit TOM70.	Mitochondrial import receptor subunit TOM40B.	0.911
LOC101341330	LOC101359699	A0A2Y9DNY1	A0A2Y9DE03	Mitochondrial import receptor subunit TOM70.	Mitochondrial import receptor subunit TOM20 homolog.	0.923
LOC101343948	LOC101341330	A0A2Y9DKL1	A0A2Y9DNY1	Mitochondrial import inner membrane translocase subunit Tim22.	Mitochondrial import receptor subunit TOM70.	0.531
LOC101343948	LOC101347642	A0A2Y9DKL1	A0A2Y9EAB3	Mitochondrial import inner membrane translocase subunit Tim22.	Mitochondrial import receptor subunit TOM40B.	0.527
LOC101347642	LOC101340880	A0A2Y9EAB3	A0A2Y9DAW2	Mitochondrial import receptor subunit TOM40B.	TOMM20-like protein 1.	0.849
LOC101347642	LOC101341330	A0A2Y9EAB3	A0A2Y9DNY1	Mitochondrial import receptor subunit TOM40B.	Mitochondrial import receptor subunit TOM70.	0.911
LOC101347642	LOC101343948	A0A2Y9EAB3	A0A2Y9DKL1	Mitochondrial import receptor subunit TOM40B.	Mitochondrial import inner membrane translocase subunit Tim22.	0.527
LOC101347642	LOC101359699	A0A2Y9EAB3	A0A2Y9DE03	Mitochondrial import receptor subunit TOM40B.	Mitochondrial import receptor subunit TOM20 homolog.	0.849
LOC101359699	LOC101341330	A0A2Y9DE03	A0A2Y9DNY1	Mitochondrial import receptor subunit TOM20 homolog.	Mitochondrial import receptor subunit TOM70.	0.923
LOC101359699	LOC101347642	A0A2Y9DE03	A0A2Y9EAB3	Mitochondrial import receptor subunit TOM20 homolog.	Mitochondrial import receptor subunit TOM40B.	0.849