47 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101347243	Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1. (217 aa)
	LOC101347499	Vesicle-associated membrane protein 2 isoform X1. (128 aa)
	LOC101360243	Ubiquitin-protein ligase E3B. (774 aa)
	LOC101357896	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (211 aa)
	LOC101350087	Vesicle transport protein USE1. (273 aa)
	LOC101354105	Syntaxin-18 isoform X1. (336 aa)
	LOC101345143	Synaptosomal-associated protein 47 isoform X1. (468 aa)
	LOC101345823	Vesicle-associated membrane protein 3. (111 aa)
	LOC101355044	Syntaxin-4; Belongs to the syntaxin family. (298 aa)
	LOC101354615	syntaxin-1B; Belongs to the syntaxin family. (288 aa)
	LOC101353091	t-SNARE domain-containing protein 1. (504 aa)
	LOC101340416	BET1-like protein. (111 aa)
	LOC101352241	Syntaxin-10; Belongs to the syntaxin family. (249 aa)
	LOC101357135	Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (215 aa)
	LOC101342605	Alpha-soluble NSF attachment protein isoform X1. (295 aa)
	LOC101361620	syntaxin-1A; Belongs to the syntaxin family. (288 aa)
	LOC101353255	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (175 aa)
	LOC101352812	Complexin-1. (134 aa)
	LOC101342354	Vesicle-associated membrane protein 4. (141 aa)
	LOC101343054	Syntaxin-3; Belongs to the syntaxin family. (304 aa)
	LOC101356256	Synaptosomal-associated protein 29. (253 aa)
	LOC101347111	Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family. (198 aa)
	LOC101345658	Gamma-soluble NSF attachment protein isoform X1. (312 aa)
	LOC101361633	Syntaxin-5 isoform X1; Belongs to the syntaxin family. (355 aa)
	LOC101341274	BET1 homolog isoform X1. (155 aa)
	LOC101350346	Vesicle-associated membrane protein 1 isoform X1. (149 aa)
	LOC101356168	Syntaxin-binding protein 5 isoform X1. (1153 aa)
	LOC101354131	Syntaxin-7; Belongs to the syntaxin family. (263 aa)
	LOC101348396	Syntaxin-16 isoform X1; Belongs to the syntaxin family. (322 aa)
	LOC101357687	Vesicle transport through interaction with t-SNAREs homolog 1B isoform X1. (232 aa)
	LOC101348328	Complexin-2. (134 aa)
	LOC101350272	Syntaxin-19; Belongs to the syntaxin family. (294 aa)
	LOC101347239	Syntaxin-binding protein 5-like isoform X1. (1180 aa)
	LOC101359705	Sorting nexin-4 isoform X1. (450 aa)
	LOC101342400	Golgi SNAP receptor complex member 2 isoform X1; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
	LOC101356869	Complexin-3. (101 aa)
	LOC101344950	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (250 aa)
	LOC101343174	Syntaxin-8. (236 aa)
	LOC101352194	Beta-soluble NSF attachment protein isoform X1. (298 aa)
	LOC101360406	Syntaxin-12 isoform X1; Belongs to the syntaxin family. (274 aa)
	LOC101344475	Complexin-4. (160 aa)
	LOC101344995	Vesicle-associated membrane protein 8. (101 aa)
	LOC101344809	Syntaxin-2; Belongs to the syntaxin family. (260 aa)
	LOC101359350	Vesicle-associated membrane protein 7 isoform X1; Belongs to the synaptobrevin family. (230 aa)
	LOC101359695	Syntaxin-17; Belongs to the syntaxin family. (302 aa)
	LOC101358887	Syntaxin-11 isoform X1; Belongs to the syntaxin family. (313 aa)
	LOC101356293	Syntaxin-6 isoform X1; Belongs to the syntaxin family. (266 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101340416	LOC101341274	A0A2Y9E9H0	A0A2Y9RW88	BET1-like protein.	BET1 homolog isoform X1.	0.938
LOC101340416	LOC101342354	A0A2Y9E9H0	A0A2Y9DZU0	BET1-like protein.	Vesicle-associated membrane protein 4.	0.490
LOC101340416	LOC101342400	A0A2Y9E9H0	A0A2Y9DGU8	BET1-like protein.	Golgi SNAP receptor complex member 2 isoform X1; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.995
LOC101340416	LOC101342605	A0A2Y9E9H0	A0A2Y9DUS7	BET1-like protein.	Alpha-soluble NSF attachment protein isoform X1.	0.761
LOC101340416	LOC101343054	A0A2Y9E9H0	A0A2Y9RWK1	BET1-like protein.	Syntaxin-3; Belongs to the syntaxin family.	0.443
LOC101340416	LOC101343174	A0A2Y9E9H0	A0A2Y9DKS3	BET1-like protein.	Syntaxin-8.	0.400
LOC101340416	LOC101344809	A0A2Y9E9H0	A0A2Y9G3E2	BET1-like protein.	Syntaxin-2; Belongs to the syntaxin family.	0.443
LOC101340416	LOC101344950	A0A2Y9E9H0	A0A2Y9DKC2	BET1-like protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.985
LOC101340416	LOC101344995	A0A2Y9E9H0	A0A2Y9S1Y0	BET1-like protein.	Vesicle-associated membrane protein 8.	0.485
LOC101340416	LOC101345658	A0A2Y9E9H0	A0A2Y9E296	BET1-like protein.	Gamma-soluble NSF attachment protein isoform X1.	0.675
LOC101340416	LOC101345823	A0A2Y9E9H0	A0A2Y9RT86	BET1-like protein.	Vesicle-associated membrane protein 3.	0.485
LOC101340416	LOC101347111	A0A2Y9E9H0	A0A2Y9E2V5	BET1-like protein.	Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family.	0.987
LOC101340416	LOC101347243	A0A2Y9E9H0	A0A2Y9QQH8	BET1-like protein.	Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.	0.518
LOC101340416	LOC101347499	A0A2Y9E9H0	A0A2Y9R042	BET1-like protein.	Vesicle-associated membrane protein 2 isoform X1.	0.485
LOC101340416	LOC101348396	A0A2Y9E9H0	A0A2Y9D906	BET1-like protein.	Syntaxin-16 isoform X1; Belongs to the syntaxin family.	0.505
LOC101340416	LOC101350087	A0A2Y9E9H0	A0A2Y9RJH1	BET1-like protein.	Vesicle transport protein USE1.	0.610
LOC101340416	LOC101350272	A0A2Y9E9H0	A0A2Y9DB95	BET1-like protein.	Syntaxin-19; Belongs to the syntaxin family.	0.428
LOC101340416	LOC101350346	A0A2Y9E9H0	A0A2Y9RUG2	BET1-like protein.	Vesicle-associated membrane protein 1 isoform X1.	0.485
LOC101340416	LOC101352194	A0A2Y9E9H0	A0A2Y9DKX8	BET1-like protein.	Beta-soluble NSF attachment protein isoform X1.	0.761
LOC101340416	LOC101352241	A0A2Y9E9H0	A0A2Y9EAV8	BET1-like protein.	Syntaxin-10; Belongs to the syntaxin family.	0.400