STRINGSTRING
LOC101344874 LOC101344874 LOC101346735 LOC101346735 LOC101358398 LOC101358398 LOC101344635 LOC101344635 LOC101347425 LOC101347425 LOC101357724 LOC101357724 LOC101341662 LOC101341662 LOC101357725 LOC101357725 LOC101361133 LOC101361133 LOC101361135 LOC101361135 LOC101349586 LOC101349586 LOC101351815 LOC101351815 LOC101347314 LOC101347314 LOC101347057 LOC101347057 LOC101358380 LOC101358380 LOC101341143 LOC101341143 LOC101356952 LOC101356952 LOC101346208 LOC101346208 LOC101354917 LOC101354917 LOC101356033 LOC101356033 LOC101359800 LOC101359800 LOC101340542 LOC101340542 LOC101340968 LOC101340968 LOC101350483 LOC101350483 LOC101358847 LOC101358847 LOC101360259 LOC101360259 LOC101361726 LOC101361726 LOC101355530 LOC101355530 LOC101340462 LOC101340462 LOC101344378 LOC101344378 LOC101346581 LOC101346581 LOC101360311 LOC101360311 LOC101349939 LOC101349939 LOC101361340 LOC101361340 LOC101360833 LOC101360833 LOC101344690 LOC101344690 LOC101349345 LOC101349345 LOC101353721 LOC101353721 LOC101343992 LOC101343992 LOC105755988 LOC105755988 LOC101344087 LOC101344087 LOC101347441 LOC101347441 LOC101342757 LOC101342757 LOC101343239 LOC101343239 LOC101354416 LOC101354416 LOC101361980 LOC101361980 LOC101359234 LOC101359234 LOC101347112 LOC101347112 LOC101348135 LOC101348135 LOC101352164 LOC101352164 LOC101348963 LOC101348963 LOC101340930 LOC101340930 LOC101342515 LOC101342515 LOC101360907 LOC101360907 LOC101354234 LOC101354234 LOC101346960 LOC101346960 LOC101353461 LOC101353461 LOC101357178 LOC101357178 LOC101353605 LOC101353605 LOC101350604 LOC101350604 LOC101344813 LOC101344813 LOC101358877 LOC101358877 LOC101353429 LOC101353429 LOC101343533 LOC101343533 LOC101351519 LOC101351519 LOC101355032 LOC101355032 LOC101345560 LOC101345560 LOC101345227 LOC101345227 LOC101352642 LOC101352642 LOC101354272 LOC101354272
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101344874alanine--tRNA ligase, mitochondrial; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (985 aa)
LOC101346735isoleucine--tRNA ligase, mitochondrial. (1012 aa)
LOC10135839839S ribosomal protein L44, mitochondrial. (332 aa)
LOC101344635FAST kinase domain-containing protein 2, mitochondrial. (698 aa)
LOC10134742539S ribosomal protein L45, mitochondrial. (329 aa)
LOC10135772439S ribosomal protein L2, mitochondrial. (306 aa)
LOC10134166239S ribosomal protein S18a, mitochondrial. (195 aa)
LOC10135772528S ribosomal protein S10, mitochondrial. (205 aa)
LOC10136113328S ribosomal protein S25, mitochondrial. (173 aa)
LOC101361135Probable leucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (903 aa)
LOC101349586Peptide chain release factor 1-like, mitochondrial isoform X1. (380 aa)
LOC10135181539S ribosomal protein L53, mitochondrial. (113 aa)
LOC10134731428S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family. (194 aa)
LOC10134705739S ribosomal protein L46, mitochondrial isoform X1. (280 aa)
LOC10135838039S ribosomal protein L39, mitochondrial isoform X1. (338 aa)
LOC10134114328S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family. (257 aa)
LOC10135695239S ribosomal protein L50, mitochondrial. (159 aa)
LOC10134620828S ribosomal protein S14, mitochondrial. (128 aa)
LOC101354917Probable glutamate--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (535 aa)
LOC10135603339S ribosomal protein L38, mitochondrial. (380 aa)
LOC10135980028S ribosomal protein S7, mitochondrial. (242 aa)
LOC101340542Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (330 aa)
LOC101340968Probable peptidyl-tRNA hydrolase. (215 aa)
LOC10135048328S ribosomal protein S35, mitochondrial. (288 aa)
LOC101358847tryptophan--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (360 aa)
LOC10136025939S ribosomal protein L21, mitochondrial isoform X1. (213 aa)
LOC101361726Translation initiation factor IF-2, mitochondrial isoform X1. (727 aa)
LOC101355530Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] (752 aa)
LOC101340462Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. (142 aa)
LOC101344378Peptide chain release factor 1, mitochondrial isoform X1. (446 aa)
LOC101346581Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. (574 aa)
LOC101360311peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X3. (230 aa)
LOC101349939Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily. (630 aa)
LOC101361340Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. (780 aa)
LOC10136083339S ribosomal protein L28, mitochondrial isoform X1. (256 aa)
LOC10134469039S ribosomal protein L40, mitochondrial isoform X1. (237 aa)
LOC10134934539S ribosomal protein L52, mitochondrial isoform X1. (124 aa)
LOC101353721Tyrosine--tRNA ligase. (479 aa)
LOC101343992Pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X1. (710 aa)
LOC10575598828S ribosomal protein S24, mitochondrial. (167 aa)
LOC10134408739S ribosomal protein L43, mitochondrial. (155 aa)
LOC10134744139S ribosomal protein L47, mitochondrial isoform X1. (252 aa)
LOC101342757LOW QUALITY PROTEIN: 28S ribosomal protein S23, mitochondrial. (188 aa)
LOC101343239aspartate--tRNA ligase, mitochondrial. (654 aa)
LOC10135441628S ribosomal protein S34, mitochondrial isoform X2. (225 aa)
LOC101361980Ribosomal protein 63, mitochondrial. (102 aa)
LOC10135923428S ribosomal protein S31, mitochondrial isoform X1. (388 aa)
LOC101347112Translation initiation factor IF-3, mitochondrial isoform X1. (295 aa)
LOC10134813528S ribosomal protein S29, mitochondrial isoform X1. (413 aa)
LOC10135216428S ribosomal protein S2, mitochondrial. (316 aa)
LOC10134896339S ribosomal protein L42, mitochondrial isoform X1. (180 aa)
LOC10134093028S ribosomal protein S6, mitochondrial. (124 aa)
LOC10134251528S ribosomal protein S22, mitochondrial isoform X3. (358 aa)
LOC10136090728S ribosomal protein S18b, mitochondrial. (258 aa)
LOC10135423439S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. (251 aa)
LOC101346960Probable arginine--tRNA ligase, mitochondrial isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (578 aa)
LOC10135346128S ribosomal protein S21, mitochondrial. (87 aa)
LOC10135717839S ribosomal protein L23, mitochondrial. (225 aa)
LOC101353605serine--tRNA ligase, mitochondrial. (511 aa)
LOC10135060439S ribosomal protein L51, mitochondrial. (128 aa)
LOC10134481328S ribosomal protein S28, mitochondrial. (187 aa)
LOC101358877Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (452 aa)
LOC101353429LOW QUALITY PROTEIN: aurora kinase A-interacting protein. (263 aa)
LOC10134353328S ribosomal protein S26, mitochondrial. (205 aa)
LOC101351519Coiled-coil-helix-coiled-coil-helix domain-containing protein 1. (118 aa)
LOC10135503228S ribosomal protein S16, mitochondrial. (135 aa)
LOC10134556028S ribosomal protein S33, mitochondrial. (106 aa)
LOC101345227Nitric oxide-associated protein 1. (698 aa)
LOC10135264239S ribosomal protein L48, mitochondrial. (212 aa)
LOC101354272Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (325 aa)
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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