STRINGSTRING
LOC101360796 LOC101360796 LOC101361730 LOC101361730 LOC101345375 LOC101345375 LOC101354086 LOC101354086 LOC101358963 LOC101358963 LOC101354979 LOC101354979 LOC101349032 LOC101349032 LOC101361717 LOC101361717 LOC101358532 LOC101358532 LOC101360500 LOC101360500 LOC101344687 LOC101344687 LOC101353868 LOC101353868 LOC101360456 LOC101360456 LOC101359166 LOC101359166 LOC101357106 LOC101357106 LOC101347922 LOC101347922 LOC101348178 LOC101348178 LOC101341892 LOC101341892 LOC101340620 LOC101340620 LOC101355091 LOC101355091 LOC101354675 LOC101354675 LOC101359426 LOC101359426 LOC101361138 LOC101361138
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101360796Cleavage and polyadenylation specificity factor subunit 1. (1444 aa)
LOC101361730Cytoplasmic polyadenylation element-binding protein 3 isoform X1. (729 aa)
LOC101345375RNA-binding protein MEX3D. (650 aa)
LOC101354086Interleukin enhancer-binding factor 3 isoform X4. (938 aa)
LOC101358963Exosome complex component RRP45 isoform X1. (441 aa)
LOC101354979Cytoplasmic polyadenylation element-binding protein 2. (867 aa)
LOC101349032Far upstream element-binding protein 2. (603 aa)
LOC101361717C->U-editing enzyme APOBEC-1. (248 aa)
LOC101358532Exosome complex component RRP41. (245 aa)
LOC101360500ATP-dependent RNA helicase DHX36. (1005 aa)
LOC101344687Exosome complex component RRP43 isoform X1. (276 aa)
LOC101353868mRNA decay activator protein ZFP36L2. (498 aa)
LOC101360456Nucleolysin TIA-1 isoform X1. (386 aa)
LOC101359166Cytoplasmic polyadenylation element-binding protein 1 isoform X1. (561 aa)
LOC101357106Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
LOC101347922ELAV-like protein; Belongs to the RRM elav family. (326 aa)
LOC101348178ELAV-like protein; Belongs to the RRM elav family. (356 aa)
LOC101341892ELAV-like protein; Belongs to the RRM elav family. (402 aa)
LOC101340620Endoribonuclease ZC3H12A isoform X1. (612 aa)
LOC101355091Nucleolysin TIAR isoform X1. (392 aa)
LOC101354675RNA-binding motif, single-stranded-interacting protein 3 isoform X1. (436 aa)
LOC101359426mRNA decay activator protein ZFP36L1. (338 aa)
LOC101361138mRNA decay activator protein ZFP36. (322 aa)
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.