STRINGSTRING
LOC101356832 LOC101356832 LOC101343140 LOC101343140 LOC101345830 LOC101345830 LOC111822755 LOC111822755 LOC101359149 LOC101359149 LOC101358804 LOC101358804 LOC101348293 LOC101348293 LOC101350347 LOC101350347 LOC101348131 LOC101348131 LOC101357166 LOC101357166 LOC101350091 LOC101350091 LOC101352164 LOC101352164 LOC101359404 LOC101359404 LOC101355904 LOC101355904 LOC101345743 LOC101345743 LOC101347378 LOC101347378 LOC101346595 LOC101346595 LOC101345057 LOC101345057 LOC101351097 LOC101351097 LOC101346010 LOC101346010 LOC101351549 LOC101351549 LOC101358963 LOC101358963 LOC101353712 LOC101353712 LOC101349399 LOC101349399 LOC101358429 LOC101358429 LOC101347272 LOC101347272 LOC101347105 LOC101347105 LOC101355631 LOC101355631 LOC101340488 LOC101340488 LOC101351261 LOC101351261 LOC101356146 LOC101356146 LOC101355802 LOC101355802 LOC101342603 LOC101342603 LOC101341588 LOC101341588 LOC101356593 LOC101356593 LOC101340740 LOC101340740 LOC101348775 LOC101348775 LOC101345992 LOC101345992 LOC101353245 LOC101353245 LOC101343964 LOC101343964 LOC101346662 LOC101346662 LOC101348269 LOC101348269 LOC101358447 LOC101358447 LOC101346828 LOC101346828 LOC101343356 LOC101343356 LOC101354763 LOC101354763 LOC101354097 LOC101354097 LOC101360589 LOC101360589 LOC101340712 LOC101340712 LOC101360684 LOC101360684 LOC101346313 LOC101346313 LOC101346822 LOC101346822 LOC101341476 LOC101341476 LOC101351941 LOC101351941 LOC101361352 LOC101361352 LOC101360484 LOC101360484 LOC101349587 LOC101349587 LOC101342243 LOC101342243 LOC101361769 LOC101361769 LOC101341652 LOC101341652 LOC101348159 LOC101348159 LOC101350631 LOC101350631 LOC101354075 LOC101354075 LOC101359438 LOC101359438 LOC101359437 LOC101359437 LOC101348259 LOC101348259 LOC101349442 LOC101349442 LOC111819696 LOC111819696 LOC101359623 LOC101359623 LOC101347417 LOC101347417 LOC101353994 LOC101353994 LOC101351843 LOC101351843 LOC101349942 LOC101349942 LOC101358385 LOC101358385 LOC101352186 LOC101352186 LOC101352774 LOC101352774 LOC101350192 LOC101350192 LOC101352427 LOC101352427 LOC101340420 LOC101340420 LOC101347548 LOC101347548 LOC101351125 LOC101351125 LOC101347645 LOC101347645 LOC101358916 LOC101358916 LOC101357619 LOC101357619 LOC101349090 LOC101349090 LOC101340883 LOC101340883 LOC101361927 LOC101361927 LOC101358910 LOC101358910 LOC101354904 LOC101354904 LOC101342724 LOC101342724 LOC101352332 LOC101352332 LOC101349914 LOC101349914 LOC101356820 LOC101356820 LOC101343484 LOC101343484 LOC101359785 LOC101359785 LOC101356092 LOC101356092 LOC101342679 LOC101342679 LOC105756260 LOC105756260 LOC101347450 LOC101347450 LOC101348119 LOC101348119 LOC105756215 LOC105756215 LOC101355306 LOC101355306 LOC101351423 LOC101351423 LOC101353745 LOC101353745 LOC101343698 LOC101343698 LOC101362026 LOC101362026 LOC101342569 LOC101342569 LOC101357121 LOC101357121 LOC101361085 LOC101361085 LOC101361075 LOC101361075 LOC101349428 LOC101349428 LOC101341137 LOC101341137 LOC101344687 LOC101344687 LOC101343155 LOC101343155 LOC101361916 LOC101361916 LOC101361405 LOC101361405 LOC101354473 LOC101354473 LOC101343549 LOC101343549 LOC101347045 LOC101347045 LOC101347473 LOC101347473 LOC101355402 LOC101355402 LOC101346538 LOC101346538 LOC101344583 LOC101344583 LOC101361400 LOC101361400 LOC101361654 LOC101361654 LOC101354123 LOC101354123 LOC101360963 LOC101360963 LOC101359583 LOC101359583 LOC101360360 LOC101360360 LOC101341435 LOC101341435 LOC101358532 LOC101358532 LOC101360270 LOC101360270 LOC101352924 LOC101352924 LOC101358623 LOC101358623 LOC101349991 LOC101349991 LOC101351713 LOC101351713 LOC101353593 LOC101353593 LOC101359663 LOC101359663 LOC101360528 LOC101360528 LOC101357242 LOC101357242 LOC101355727 LOC101355727 LOC101354116 LOC101354116 LOC101347202 LOC101347202 LOC101342529 LOC101342529 LOC101340850 LOC101340850 LOC101345741 LOC101345741 LOC101354288 LOC101354288 LOC101346003 LOC101346003 LOC101346521 LOC101346521 LOC101341267 LOC101341267 LOC101343367 LOC101343367 LOC101348793 LOC101348793 LOC101345055 LOC101345055 LOC101349144 LOC101349144 LOC101352218 LOC101352218 LOC101360519 LOC101360519 LOC101350485 LOC101350485 LOC101351000 LOC101351000 LOC101359485 LOC101359485 LOC101348790 LOC101348790 LOC101350914 LOC101350914 LOC101356986 LOC101356986 LOC101359912 LOC101359912 LOC101361205 LOC101361205 LOC101340741 LOC101340741 LOC101353508 LOC101353508 LOC101342947 LOC101342947 LOC101343799 LOC101343799 LOC101346159 LOC101346159 LOC101345561 LOC101345561 LOC101341252 LOC101341252 LOC101354098 LOC101354098 LOC101359641 LOC101359641 LOC101342181 LOC101342181 LOC101351513 LOC101351513 LOC101360770 LOC101360770 LOC101361026 LOC101361026 LOC101342424 LOC101342424 LOC101350210 LOC101350210 LOC101347933 LOC101347933 LOC101351075 LOC101351075 LOC101344796 LOC101344796 LOC101359637 LOC101359637 LOC101342340 LOC101342340 LOC101359378 LOC101359378 LOC101361106 LOC101361106 LOC101344041 LOC101344041 LOC101351422 LOC101351422 LOC101354186 LOC101354186 LOC101342175 LOC101342175 LOC101341080 LOC101341080 LOC101359292 LOC101359292 LOC101343703 LOC101343703 LOC101359982 LOC101359982 LOC101348436 LOC101348436 LOC101355441 LOC101355441 LOC101348359 LOC101348359 LOC101362036 LOC101362036 LOC101348098 LOC101348098 LOC101354010 LOC101354010 LOC101353490 LOC101353490 LOC101356129 LOC101356129 LOC101349118 LOC101349118 LOC101351766 LOC101351766 LOC101346914 LOC101346914 LOC101344635 LOC101344635 LOC101351592 LOC101351592 LOC101352116 LOC101352116 LOC101347083 LOC101347083 LOC101347843 LOC101347843 LOC101345974 LOC101345974 LOC101342676 LOC101342676 LOC101349373 LOC101349373 LOC101343508 LOC101343508 LOC101361517 LOC101361517 LOC101358398 LOC101358398 LOC101360321 LOC101360321 LOC101341650 LOC101341650 LOC101343427 LOC101343427 LOC101351757 LOC101351757 LOC101345791 LOC101345791 LOC101346733 LOC101346733 LOC101348680 LOC101348680 LOC101355092 LOC101355092 LOC101355342 LOC101355342 LOC101342664 LOC101342664 LOC101340701 LOC101340701 LOC101355686 LOC101355686 LOC101359800 LOC101359800 LOC101361084 LOC101361084 LOC101340627 LOC101340627 LOC101345026 LOC101345026 LOC101344118 LOC101344118 LOC101348083 LOC101348083 LOC101348927 LOC101348927 LOC101359180 LOC101359180 LOC101348080 LOC101348080 LOC101359442 LOC101359442 LOC101361249 LOC101361249 LOC101355509 LOC101355509 LOC101344456 LOC101344456 LOC101356292 LOC101356292 LOC101349180 LOC101349180 LOC101360394 LOC101360394 LOC101340891 LOC101340891 LOC101342475 LOC101342475 LOC101342818 LOC101342818 LOC101357193 LOC101357193 LOC101353290 LOC101353290 LOC101359694 LOC101359694 LOC101345186 LOC101345186 LOC101356190 LOC101356190 LOC101359170 LOC101359170 LOC101349268 LOC101349268 LOC101352433 LOC101352433 LOC101348659 LOC101348659 LOC101347318 LOC101347318 LOC101353879 LOC101353879 LOC101359601 LOC101359601 LOC101355065 LOC101355065 LOC101352428 LOC101352428 LOC101347815 LOC101347815 LOC101347314 LOC101347314 LOC101348062 LOC101348062 LOC101358455 LOC101358455 LOC101346188 LOC101346188 LOC101359681 LOC101359681 LOC101352589 LOC101352589 LOC101361660 LOC101361660 LOC101358979 LOC101358979 LOC101361479 LOC101361479 LOC101348477 LOC101348477 LOC101345069 LOC101345069 LOC101344996 LOC101344996 LOC101348807 LOC101348807 LOC101360364 LOC101360364 LOC101345925 LOC101345925 LOC101351373 LOC101351373
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101356832Cell growth-regulating nucleolar protein. (395 aa)
LOC101343140MKI67 FHA domain-interacting nucleolar phosphoprotein. (255 aa)
LOC101345830Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences; Belongs to the histone-like Alba family. (140 aa)
LOC11182275540S ribosomal protein S16. (86 aa)
LOC101359149Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses. (514 aa)
LOC101358804Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (422 aa)
LOC101348293Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (634 aa)
LOC101350347Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (737 aa)
LOC101348131Probable ATP-dependent RNA helicase DDX47 isoform X1. (149 aa)
LOC101357166rRNA 2'-O-methyltransferase fibrillarin. (317 aa)
LOC101350091Notchless protein homolog 1. (477 aa)
LOC10135216428S ribosomal protein S2, mitochondrial. (316 aa)
LOC101359404Nucleolar pre-ribosomal-associated protein 1. (2307 aa)
LOC10135590440S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (204 aa)
LOC101345743ATP-dependent RNA helicase DDX51; Belongs to the DEAD box helicase family. (649 aa)
LOC101347378Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5599 aa)
LOC101346595Periodic tryptophan protein 2 homolog. (650 aa)
LOC101345057Polynucleotide 5'-hydroxyl-kinase NOL9. (688 aa)
LOC101351097Ribosomal RNA processing protein 1 homolog B. (760 aa)
LOC101346010Elongation factor-like GTPase 1 isoform X1. (1129 aa)
LOC101351549Probable methyltransferase-like protein 15 isoform X1. (406 aa)
LOC101358963Exosome complex component RRP45 isoform X1. (441 aa)
LOC10135371240S ribosomal protein S27-like. (75 aa)
LOC10134939939S ribosomal protein L1, mitochondrial isoform X1. (346 aa)
LOC10135842940S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
LOC101347272PIH1 domain-containing protein 2. (315 aa)
LOC101347105Ribosomal RNA processing protein 1 homolog A isoform X1. (466 aa)
LOC101355631Serum response factor-binding protein 1 isoform X1. (428 aa)
LOC101340488Endoribonuclease YbeY. (151 aa)
LOC101351261U3 small nucleolar RNA-associated protein 14 homolog A-like isoform X1. (766 aa)
LOC101356146Nucleolar complex protein 2 homolog isoform X1. (703 aa)
LOC101355802Nucleolar protein 8 isoform X1. (1200 aa)
LOC101342603Probable 18S rRNA (Guanine-N(7))-methyltransferase isoform X1. (287 aa)
LOC101341588Probable 28S rRNA (Cytosine-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (466 aa)
LOC101356593Exportin-1 isoform X1. (1071 aa)
LOC101340740Nucleolar protein 56 isoform X1. (613 aa)
LOC101348775Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (118 aa)
LOC1013459923'-5' exoribonuclease 1 isoform X1. (282 aa)
LOC101353245Eukaryotic translation initiation factor 2A. (403 aa)
LOC101343964cullin-4B isoform X1; Belongs to the cullin family. (903 aa)
LOC101346662ATP-dependent RNA helicase DDX54; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (887 aa)
LOC101348269H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (228 aa)
LOC101358447Nuclear nucleic acid-binding protein C1D. (139 aa)
LOC101346828Protein AATF. (566 aa)
LOC101343356Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (477 aa)
LOC10135476360S ribosomal protein L7-like 1. (256 aa)
LOC101354097GTP-binding protein 10. (333 aa)
LOC101360589Ribonuclease P protein subunit p38. (284 aa)
LOC101340712Complement component 1 Q subcomponent-binding protein, mitochondrial. (178 aa)
LOC101360684Superkiller viralicidic activity 2-like 2. (978 aa)
LOC101346313Probable ATP-dependent RNA helicase DDX52 isoform X1. (613 aa)
LOC101346822RNA helicase. (720 aa)
LOC101341476Exosome complex component RRP4 isoform X1. (349 aa)
LOC101351941U6 snRNA-associated Sm-like protein LSm6. (80 aa)
LOC101361352tRNA (Adenine(58)-N(1))-methyltransferase, mitochondrial. (467 aa)
LOC101360484Digestive organ expansion factor homolog isoform X1. (802 aa)
LOC101349587Protein LTV1 homolog. (477 aa)
LOC101342243Myb-binding protein 1A. (1260 aa)
LOC10136176960S ribosomal protein L35. (123 aa)
LOC101341652ESF1 homolog isoform X1. (841 aa)
LOC101348159Transducin beta-like protein 3. (831 aa)
LOC101350631RNA pseudouridylate synthase domain-containing protein 1 isoform X1. (303 aa)
LOC101354075Nuclear valosin-containing protein-like isoform X1. (860 aa)
LOC101359438RNA-binding protein 34 isoform X1. (476 aa)
LOC101359437ATP-binding cassette sub-family F member 2. (625 aa)
LOC101348259Cyclin-dependent kinase 2-interacting protein isoform X1. (225 aa)
LOC101349442Zinc finger CCHC domain-containing protein 4 isoform X1. (514 aa)
LOC111819696U3 small nucleolar ribonucleoprotein protein IMP4-like. (209 aa)
LOC101359623U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (561 aa)
LOC101347417Hamartin isoform X1. (1160 aa)
LOC101353994pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (837 aa)
LOC101351843Large subunit GTPase 1 homolog isoform X1. (658 aa)
LOC101349942E3 ubiquitin-protein ligase TRAF7 isoform X1. (670 aa)
LOC1013583852-5A-dependent ribonuclease. (750 aa)
LOC101352186Probable ribosome biogenesis protein C16orf42 homolog; Probable pre-rRNA processing protein involved in ribosome biogenesis. (352 aa)
LOC101352774Nucleolar MIF4G domain-containing protein 1. (836 aa)
LOC101350192Nucleolar protein 11 isoform X1. (752 aa)
LOC101352427Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...] (245 aa)
LOC101340420LOW QUALITY PROTEIN: WD repeat-containing protein 17. (1139 aa)
LOC101347548Mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X1. (352 aa)
LOC101351125WD repeat-containing protein 46 isoform X1. (625 aa)
LOC101347645HEAT repeat-containing protein 3 isoform X1. (563 aa)
LOC101358916Small subunit processome component 20 homolog isoform X1. (2807 aa)
LOC101357619Ribosomal L1 domain-containing protein 1. (487 aa)
LOC101349090Ribonuclease P protein subunit p29. (177 aa)
LOC101340883tRNA (Cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (338 aa)
LOC101361927H/ACA ribonucleoprotein complex subunit 4. (550 aa)
LOC101358910Testis-expressed protein 10 isoform X1. (929 aa)
LOC101354904P21-activated protein kinase-interacting protein 1. (231 aa)
LOC10134272439S ribosomal protein L22, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL22 family. (212 aa)
LOC101352332Ribosome biogenesis protein BMS1 homolog. (1287 aa)
LOC101349914Transcription factor IIIA. (436 aa)
LOC101356820U4/U6.U5 tri-snRNP-associated protein 1. (804 aa)
LOC101343484LOW QUALITY PROTEIN: MKI67 FHA domain-interacting nucleolar phosphoprotein-like. (262 aa)
LOC101359785Helicase POLQ-like isoform X1. (1062 aa)
LOC101356092LOW QUALITY PROTEIN: 40S ribosomal protein S16. (146 aa)
LOC101342679LOW QUALITY PROTEIN: 60S ribosomal protein L7-like. (249 aa)
LOC105756260rRNA methyltransferase 3, mitochondrial. (423 aa)
LOC101347450Probable ATP-dependent RNA helicase DDX49 isoform X1; Belongs to the DEAD box helicase family. (481 aa)
LOC101348119Zinc finger protein 622 isoform X1. (478 aa)
LOC105756215LOW QUALITY PROTEIN: 40S ribosomal protein SA-like. (263 aa)
LOC101355306Uncharacterized protein C8orf59 homolog. (61 aa)
LOC101351423U3 small nucleolar RNA-associated protein 14 homolog A. (781 aa)
LOC101353745LOW QUALITY PROTEIN: ribonuclease P protein subunit p30-like. (333 aa)
LOC101343698tRNA (Uracil(54)-C(5))-methyltransferase homolog; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (496 aa)
LOC101362026Nuclear pore complex protein Nup88. (580 aa)
LOC101342569Uncharacterized protein C1orf109 homolog isoform X1. (216 aa)
LOC101357121RRP15-like protein. (283 aa)
LOC101361085Ribonuclease P protein subunit p25. (202 aa)
LOC101361075LOW QUALITY PROTEIN: 60S ribosomal protein L7. (245 aa)
LOC101349428Nucleolar protein 9. (635 aa)
LOC101341137Neuroguidin. (315 aa)
LOC101344687Exosome complex component RRP43 isoform X1. (276 aa)
LOC101343155Methyltransferase-like protein 17, mitochondrial. (463 aa)
LOC101361916Guanine nucleotide-binding protein-like 3-like protein isoform X1. (575 aa)
LOC101361405pre-rRNA-processing protein TSR2 homolog isoform X1. (191 aa)
LOC101354473RNA exonuclease 4. (421 aa)
LOC10134354940S ribosomal protein S27. (84 aa)
LOC101347045Surfeit locus protein 6. (353 aa)
LOC101347473Ribosomal RNA-processing protein 8; Essential component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone- modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD(+)/NADP(+) ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus. In the complex, RRP8 binds to H3K9me2 and pr [...] (457 aa)
LOC101355402Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (563 aa)
LOC10134653860S ribosomal protein L7a. (266 aa)
LOC10134458340S ribosomal protein S19. (145 aa)
LOC101361400Protein RRNAD1. (475 aa)
LOC101361654Interferon-stimulated 20 kDa exonuclease-like 2 isoform X1. (349 aa)
LOC101354123U3 small nucleolar ribonucleoprotein protein IMP4. (291 aa)
LOC101360963Spermatogenesis-associated protein 5 isoform X1. (892 aa)
LOC101359583Ribonuclease P protein subunit p40 isoform X1. (363 aa)
LOC101360360Putative ribosome-binding factor A, mitochondrial isoform X1. (347 aa)
LOC101341435WW domain-binding protein 11. (640 aa)
LOC101358532Exosome complex component RRP41. (245 aa)
LOC101360270Nucleolar RNA helicase 2. (787 aa)
LOC101352924Uncharacterized protein C8orf59 homolog. (100 aa)
LOC101358623Ribosomal RNA small subunit methyltransferase NEP1. (244 aa)
LOC101349991Transcription termination factor 4, mitochondrial. (357 aa)
LOC101351713Probable 28S rRNA (Cytosine(4447)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (818 aa)
LOC101353593Probable ATP-dependent RNA helicase DDX56. (545 aa)
LOC101359663Spermatogenesis-associated protein 5-like protein 1; Belongs to the AAA ATPase family. (475 aa)
LOC101360528ATP-dependent RNA helicase DDX50 isoform X1. (734 aa)
LOC10135724260S ribosomal protein L23a isoform X1; Belongs to the universal ribosomal protein uL23 family. (156 aa)
LOC101355727GTPase Era, mitochondrial isoform X2. (438 aa)
LOC101354116rRNA methyltransferase 2, mitochondrial isoform X1. (258 aa)
LOC10134720240S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
LOC101342529U3 small nucleolar RNA-associated protein 6 homolog. (598 aa)
LOC10134085039S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
LOC101345741KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (381 aa)
LOC101354288Probable ATP-dependent RNA helicase DHX37. (1159 aa)
LOC101346003Nucleolar complex protein 4 homolog. (516 aa)
LOC101346521Ribosome biogenesis protein BRX1 homolog. (353 aa)
LOC101341267Ribonuclease 3. (1373 aa)
LOC101343367Exosome component 10. (886 aa)
LOC101348793Protein FAM207A isoform X1. (219 aa)
LOC101345055GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (235 aa)
LOC10134914460S ribosome subunit biogenesis protein NIP7 homolog. (282 aa)
LOC10135221860S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (503 aa)
LOC101360519Coiled-coil domain-containing protein 105. (499 aa)
LOC101350485Multifunctional methyltransferase subunit TRM112-like protein. (125 aa)
LOC101351000Mpv17-like protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (197 aa)
LOC101359485Oral cancer-overexpressed protein 1. (137 aa)
LOC101348790Unhealthy ribosome biogenesis protein 2 homolog isoform X1. (1523 aa)
LOC101350914RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (414 aa)
LOC101356986Activator of basal transcription 1. (266 aa)
LOC101359912Protein MAK16 homolog; Belongs to the MAK16 family. (293 aa)
LOC101361205WD repeat-containing protein 74. (385 aa)
LOC101340741Something about silencing protein 10. (478 aa)
LOC101353508Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (688 aa)
LOC101342947Zinc finger HIT domain-containing protein 2. (404 aa)
LOC101343799cullin-4A isoform X1; Belongs to the cullin family. (762 aa)
LOC101346159Nucleolar protein 14. (854 aa)
LOC101345561Ferredoxin-fold anticodon-binding domain-containing protein 1. (625 aa)
LOC101341252RNA helicase. (911 aa)
LOC101354098TFIIH basal transcription factor complex helicase XPD subunit. (736 aa)
LOC101359641Ribosomal biogenesis protein LAS1L isoform X1. (710 aa)
LOC101342181H/ACA ribonucleoprotein complex non-core subunit NAF1. (481 aa)
LOC101351513PIH1 domain-containing protein 1. (293 aa)
LOC101360770Uncharacterized protein CXorf66 homolog. (396 aa)
LOC101361026Glutamate-rich WD repeat-containing protein 1. (445 aa)
LOC101342424DNA helicase B isoform X1. (1076 aa)
LOC101350210RNA pseudouridylate synthase domain-containing protein 2. (535 aa)
LOC101347933WD repeat-containing protein 55; Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis. Belongs to the WD repeat WDR55 family. (380 aa)
LOC101351075ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1368 aa)
LOC101344796Ribosome maturation protein SBDS isoform X1. (250 aa)
LOC101359637WD repeat-containing protein 3. (943 aa)
LOC101342340Peptidyl-prolyl cis-trans isomerase. (131 aa)
LOC101359378H/ACA ribonucleoprotein complex subunit 3. (64 aa)
LOC101361106Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC101344041Mitochondrial RNA pseudouridine synthase RPUSD4. (375 aa)
LOC101351422Bystin. (437 aa)
LOC101354186Proliferation-associated protein 2G4. (394 aa)
LOC101342175Ribosomal RNA-processing protein 7 homolog A. (279 aa)
LOC101341080Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (588 aa)
LOC101359292Ribosomal RNA processing protein 36 homolog. (270 aa)
LOC10134370360S ribosomal protein L5 isoform X1. (297 aa)
LOC10135998260S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (318 aa)
LOC10134843640S ribosomal protein S28. (69 aa)
LOC101355441Protein KRI1 homolog. (703 aa)
LOC10134835960S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (287 aa)
LOC101362036Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (200 aa)
LOC101348098Nucleolar protein 58 isoform X1. (533 aa)
LOC101354010ATP-binding cassette sub-family E member 1. (599 aa)
LOC10135349040S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
LOC101356129LOW QUALITY PROTEIN: WD repeat-containing protein 18. (423 aa)
LOC101349118Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)
LOC101351766Zinc finger HIT domain-containing protein 3. (154 aa)
LOC101346914M-phase phosphoprotein 6. (160 aa)
LOC101344635FAST kinase domain-containing protein 2, mitochondrial. (698 aa)
LOC10135159260S ribosomal protein L24. (157 aa)
LOC101352116Mitochondrial assembly of ribosomal large subunit protein 1 isoform X1. (226 aa)
LOC101347083rRNA methyltransferase 1, mitochondrial. (356 aa)
LOC101347843U3 small nucleolar RNA-associated protein 18 homolog. (555 aa)
LOC101345974WD repeat-containing protein 43. (679 aa)
LOC10134267640S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
LOC101349373Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
LOC101343508WD repeat-containing protein 36. (895 aa)
LOC101361517X-ray repair cross-complementing protein 5 isoform X1. (742 aa)
LOC10135839839S ribosomal protein L44, mitochondrial. (332 aa)
LOC101360321pre-rRNA-processing protein TSR1 homolog isoform X1. (804 aa)
LOC101341650Proline-, glutamic acid- and leucine-rich protein 1 isoform X1. (1118 aa)
LOC101343427Gem-associated protein 4 isoform X1. (1058 aa)
LOC101351757rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (397 aa)
LOC10134579160S ribosomal protein L26. (145 aa)
LOC101346733DNA-dependent protein kinase catalytic subunit isoform X1; Belongs to the PI3/PI4-kinase family. (4134 aa)
LOC101348680Methyltransferase-like protein 5 isoform X1. (209 aa)
LOC101355092Serine/threonine-protein kinase RIO2. (552 aa)
LOC101355342rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (393 aa)
LOC101342664RNA helicase. (670 aa)
LOC101340701U3 small nucleolar ribonucleoprotein protein IMP3. (233 aa)
LOC10135568640S ribosomal protein S27. (84 aa)
LOC10135980028S ribosomal protein S7, mitochondrial. (242 aa)
LOC101361084Ribosome biogenesis protein NSA2 homolog. (260 aa)
LOC101340627U3 small nucleolar RNA-associated protein 15 homolog. (518 aa)
LOC101345026Probable ribosome biogenesis protein RLP24. (163 aa)
LOC101344118Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
LOC101348083Periodic tryptophan protein 1 homolog isoform X1. (500 aa)
LOC101348927ERI1 exoribonuclease 2. (690 aa)
LOC10135918060S ribosomal protein L35a. (110 aa)
LOC101348080Nucleolar protein 10 isoform X1. (687 aa)
LOC101359442RNA 3'-terminal phosphate cyclase-like protein isoform X1. (373 aa)
LOC101361249rRNA-processing protein UTP23 homolog. (249 aa)
LOC10135550940S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
LOC101344456Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (365 aa)
LOC101356292HEAT repeat-containing protein 1 isoform X1. (2142 aa)
LOC101349180U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (676 aa)
LOC101360394Ribosome production factor 2 homolog isoform X1. (307 aa)
LOC101340891Nucleolar protein 6. (1141 aa)
LOC101342475Exosome complex component RRP40 isoform X1. (274 aa)
LOC101342818Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (727 aa)
LOC101357193ERI1 exoribonuclease 3 isoform X1. (337 aa)
LOC101353290Probable ATP-dependent RNA helicase DDX28. (538 aa)
LOC101359694U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
LOC101345186Probable rRNA-processing protein EBP2. (305 aa)
LOC10135619040S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
LOC101359170rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. (325 aa)
LOC1013492685-methylcytosine rRNA methyltransferase NSUN4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (386 aa)
LOC10135243360S ribosomal protein L26-like 1. (145 aa)
LOC101348659U3 small nucleolar RNA-associated protein 4 homolog isoform X1. (686 aa)
LOC101347318Nucleolar protein 16. (177 aa)
LOC101353879rRNA-processing protein FCF1 homolog. (198 aa)
LOC101359601Transcription termination factor 3, mitochondrial. (417 aa)
LOC101355065Nucleophosmin. (294 aa)
LOC101352428Neugrin. (299 aa)
LOC101347815DDB1- and CUL4-associated factor 13. (445 aa)
LOC10134731428S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family. (194 aa)
LOC101348062Nucleoplasmin-3. (177 aa)
LOC101358455Mitochondrial ribosome-associated GTPase 2. (404 aa)
LOC10134618840S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
LOC101359681Ribonuclease P protein subunit p30. (268 aa)
LOC101352589RRP12-like protein. (1297 aa)
LOC101361660Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family. (763 aa)
LOC101358979Protein RRP5 homolog. (1872 aa)
LOC101361479RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1026 aa)
LOC101348477Box C/D snoRNA protein 1. (473 aa)
LOC101345069Ribosome production factor 1. (348 aa)
LOC101344996rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (345 aa)
LOC101348807U3 small nucleolar RNA-interacting protein 2. (518 aa)
LOC101360364Exosome complex component RRP42. (291 aa)
LOC101345925Putative ATP-dependent RNA helicase DHX30 isoform X1. (1224 aa)
LOC10135137360S ribosomal protein L14. (217 aa)
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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