STRINGSTRING
LOC101361633 LOC101361633 LOC101357135 LOC101357135 LOC101357687 LOC101357687 LOC101346870 LOC101346870 LOC101361311 LOC101361311 LOC101341274 LOC101341274 LOC101359909 LOC101359909 LOC101347243 LOC101347243
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101361633Syntaxin-5 isoform X1; Belongs to the syntaxin family. (355 aa)
LOC101357135Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (215 aa)
LOC101357687Vesicle transport through interaction with t-SNAREs homolog 1B isoform X1. (232 aa)
LOC101346870Protein YIPF. (244 aa)
LOC101361311Protein YIPF. (261 aa)
LOC101341274BET1 homolog isoform X1. (155 aa)
LOC101359909General vesicular transport factor p115 isoform X1. (873 aa)
LOC101347243Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1. (217 aa)
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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