STRINGSTRING
LOC101340751 LOC101340751 LOC101350095 LOC101350095 LOC101341505 LOC101341505 LOC101357083 LOC101357083 LOC111822667 LOC111822667 LOC101352927 LOC101352927 LOC101346958 LOC101346958 LOC101350684 LOC101350684 LOC101353092 LOC101353092 LOC101344256 LOC101344256 LOC101353701 LOC101353701 LOC101354044 LOC101354044 LOC101360893 LOC101360893 LOC101341447 LOC101341447 LOC101342054 LOC101342054 LOC101340880 LOC101340880 LOC101348072 LOC101348072 LOC101355065 LOC101355065 LOC101355072 LOC101355072 LOC101354240 LOC101354240 LOC101347323 LOC101347323 LOC101340891 LOC101340891 LOC101359699 LOC101359699 LOC101343761 LOC101343761 LOC101358739 LOC101358739 LOC101354323 LOC101354323 LOC101354246 LOC101354246 LOC101344118 LOC101344118 LOC101347665 LOC101347665 LOC101348254 LOC101348254 LOC101355769 LOC101355769 LOC101348172 LOC101348172 LOC101342326 LOC101342326 LOC101353394 LOC101353394 LOC101354258 LOC101354258 LOC101358146 LOC101358146 LOC101361438 LOC101361438 LOC101359629 LOC101359629 LOC101360412 LOC101360412 LOC101356311 LOC101356311 LOC101344548 LOC101344548 LOC101341748 LOC101341748 LOC101352282 LOC101352282 LOC101342420 LOC101342420 LOC101346495 LOC101346495 LOC101358242 LOC101358242 LOC101350822 LOC101350822 LOC101341340 LOC101341340 LOC101349211 LOC101349211 LOC101344646 LOC101344646 LOC101352130 LOC101352130 LOC101346153 LOC101346153 LOC101343532 LOC101343532 LOC101359128 LOC101359128 LOC101356246 LOC101356246 LOC101362056 LOC101362056 LOC101344892 LOC101344892 LOC101361804 LOC101361804 LOC101345055 LOC101345055 LOC101359313 LOC101359313 LOC101351631 LOC101351631 LOC101343982 LOC101343982 LOC101353347 LOC101353347 LOC101360274 LOC101360274 LOC101348897 LOC101348897 LOC101342790 LOC101342790 LOC101344499 LOC101344499 LOC101343039 LOC101343039 LOC101345001 LOC101345001 LOC101341542 LOC101341542 LOC101344349 LOC101344349 LOC101341887 LOC101341887 LOC101347989 LOC101347989 LOC101362026 LOC101362026 LOC101349032 LOC101349032 LOC101348698 LOC101348698 LOC101342413 LOC101342413 LOC101359573 LOC101359573 LOC101343812 LOC101343812 LOC105756645 LOC105756645 LOC101343677 LOC101343677 LOC101342572 LOC101342572 LOC101342657 LOC101342657 LOC101341139 LOC101341139 LOC101343412 LOC101343412 LOC101355324 LOC101355324 LOC101360638 LOC101360638 LOC101340800 LOC101340800 LOC101359794 LOC101359794 LOC101341638 LOC101341638 LOC101354626 LOC101354626 LOC101347325 LOC101347325 LOC101341526 LOC101341526 LOC101358052 LOC101358052 LOC101342921 LOC101342921 LOC101347417 LOC101347417 LOC101354487 LOC101354487 LOC101340442 LOC101340442 LOC101340286 LOC101340286 LOC101340895 LOC101340895 LOC101352883 LOC101352883 LOC101356111 LOC101356111 LOC111820450 LOC111820450 LOC101361171 LOC101361171 LOC111820956 LOC111820956 LOC101353303 LOC101353303 LOC101347999 LOC101347999 LOC101351071 LOC101351071 LOC101355525 LOC101355525 LOC101354584 LOC101354584 LOC101360331 LOC101360331 LOC101352367 LOC101352367 LOC101345896 LOC101345896 LOC111821149 LOC111821149 LOC101354601 LOC101354601 LOC101346586 LOC101346586 LOC101343717 LOC101343717 LOC101351905 LOC101351905 LOC101356593 LOC101356593 LOC101356513 LOC101356513 LOC101355993 LOC101355993 LOC101359743 LOC101359743
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101340751LOW QUALITY PROTEIN: germinal-center associated nuclear protein. (1624 aa)
LOC101350095Protein IWS1 homolog isoform X1. (846 aa)
LOC101341505Histone RNA hairpin-binding protein isoform X1. (258 aa)
LOC101357083Nuclear pore complex protein Nup160 isoform X1. (1431 aa)
LOC111822667Nuclear pore complex protein Nup160-like isoform X1. (243 aa)
LOC101352927LOW QUALITY PROTEIN: POM121-like protein 2. (707 aa)
LOC101346958Chromatin target of PRMT1 protein isoform X1. (289 aa)
LOC101350684mRNA export factor isoform X1. (409 aa)
LOC101353092Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (322 aa)
LOC10134425639S ribosomal protein L18, mitochondrial. (265 aa)
LOC101353701Nucleoporin Nup43. (380 aa)
LOC101354044ranBP2-like and GRIP domain-containing protein 4 isoform X1. (3043 aa)
LOC101360893Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
LOC101341447Hematopoietically-expressed homeobox protein HHEX. (272 aa)
LOC101342054Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] (101 aa)
LOC101340880TOMM20-like protein 1. (150 aa)
LOC101348072THO complex subunit 3. (351 aa)
LOC101355065Nucleophosmin. (294 aa)
LOC101355072Protein mago nashi homolog. (146 aa)
LOC101354240Nucleoporin NDC1 isoform X1. (810 aa)
LOC101347323Nuclease-sensitive element-binding protein 1. (411 aa)
LOC101340891Nucleolar protein 6. (1141 aa)
LOC101359699Mitochondrial import receptor subunit TOM20 homolog. (145 aa)
LOC101343761Nucleoprotein TPR isoform X1. (2436 aa)
LOC101358739UAP56-interacting factor. (317 aa)
LOC101354323Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
LOC101354246Sulfurtransferase. (297 aa)
LOC101344118Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
LOC101347665Centrin-3 isoform X1. (167 aa)
LOC101348254Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (957 aa)
LOC101355769Zinc finger CCCH domain-containing protein 11A isoform X1. (816 aa)
LOC101348172Lupus La protein. (405 aa)
LOC101342326Unconventional myosin-Ic; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1063 aa)
LOC101353394Nucleoporin GLE1. (699 aa)
LOC101354258TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (592 aa)
LOC101358146Insulin-like growth factor 2 mRNA-binding protein 3 isoform X1. (579 aa)
LOC101361438Protein CASC3 isoform X1. (703 aa)
LOC101359629Raftlin-2. (502 aa)
LOC101360412Insulin-like growth factor 2 mRNA-binding protein 1 isoform X1. (577 aa)
LOC101356311THO complex subunit 5 homolog isoform X1. (683 aa)
LOC101344548ATP-dependent RNA helicase DDX25. (520 aa)
LOC101341748Serine/arginine-rich splicing factor 3. (164 aa)
LOC101352282RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
LOC101342420Polymerase delta-interacting protein 3 isoform X1. (421 aa)
LOC101346495Nuclear pore complex protein Nup50. (468 aa)
LOC101358242SAP domain-containing ribonucleoprotein. (210 aa)
LOC101350822RNA demethylase ALKBH5. (394 aa)
LOC101341340Nuclear envelope pore membrane protein POM 121. (1072 aa)
LOC101349211Synaptic functional regulator FMR1 isoform X1. (632 aa)
LOC101344646Nuclear pore glycoprotein p62. (516 aa)
LOC101352130Insulin-like growth factor 2 mRNA-binding protein 2. (580 aa)
LOC101346153Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (962 aa)
LOC101343532PCI domain-containing protein 2 isoform X1. (329 aa)
LOC101359128Nucleoporin p54. (328 aa)
LOC101356246Eukaryotic translation initiation factor 5A. (153 aa)
LOC101362056Nuclear RNA export factor 1 isoform X1. (617 aa)
LOC101344892Nuclear pore complex protein Nup133 isoform X1. (1156 aa)
LOC101361804Phosphorylated adapter RNA export protein isoform X1. (394 aa)
LOC101345055GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (235 aa)
LOC10135931326S proteasome complex subunit SEM1. (70 aa)
LOC101351631DNA-directed RNA polymerase II subunit RPB4. (142 aa)
LOC101343982Nucleoporin p58/p45 isoform X1. (599 aa)
LOC101353347Activity-regulated cytoskeleton-associated protein. (397 aa)
LOC101360274Heat shock factor protein 1. (525 aa)
LOC101348897Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (958 aa)
LOC101342790LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX19A. (472 aa)
LOC101344499Nuclear pore complex protein Nup155 isoform X1. (1393 aa)
LOC101343039ATP-dependent RNA helicase DDX19B. (479 aa)
LOC101345001Nuclear RNA export factor 2-like. (398 aa)
LOC101341542THO complex subunit 1. (657 aa)
LOC101344349Nucleoporin SEH1 isoform X2; Belongs to the WD repeat SEC13 family. (421 aa)
LOC101341887Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (428 aa)
LOC101347989Protein mago nashi homolog 2. (148 aa)
LOC101362026Nuclear pore complex protein Nup88. (580 aa)
LOC101349032Far upstream element-binding protein 2. (603 aa)
LOC101348698Nuclear pore complex protein Nup98-Nup96 isoform X1. (1881 aa)
LOC101342413Nuclear RNA export factor 3-like. (615 aa)
LOC101359573Raftlin. (588 aa)
LOC101343812Uncharacterized protein. (168 aa)
LOC105756645Nuclear pore-associated protein 1-like. (876 aa)
LOC101343677LOW QUALITY PROTEIN: nuclear RNA export factor 2-like. (551 aa)
LOC101342572Nuclear RNA export factor 2-like. (273 aa)
LOC101342657Nuclear RNA export factor 2-like. (381 aa)
LOC101341139Spliceosome RNA helicase DDX39B isoform X1. (428 aa)
LOC101343412Nuclear RNA export factor 3-like. (562 aa)
LOC101355324Nuclear transport factor 2 isoform X1. (138 aa)
LOC101360638ATP-dependent RNA helicase DDX39A isoform X1. (515 aa)
LOC101340800Nuclear cap-binding protein subunit 1 isoform X1. (835 aa)
LOC101359794ATP-dependent RNA helicase A isoform X1. (1281 aa)
LOC101341638Nuclear RNA export factor 3. (600 aa)
LOC101354626THO complex subunit 7 homolog isoform X1. (227 aa)
LOC101347325Uncharacterized protein C12orf50 homolog. (301 aa)
LOC101341526Protein quaking isoform X1. (298 aa)
LOC101358052Nucleoporin NUP188 homolog. (1731 aa)
LOC101342921Nuclear pore complex protein Nup214. (2102 aa)
LOC101347417Hamartin isoform X1. (1160 aa)
LOC101354487Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
LOC101340442Snurportin-1 isoform X1. (368 aa)
LOC101340286THO complex subunit 4. (321 aa)
LOC101340895THO complex subunit 6 homolog isoform X1. (420 aa)
LOC101352883NTF2-related export protein 1. (140 aa)
LOC101356111LOW QUALITY PROTEIN: SID1 transmembrane family member 1. (648 aa)
LOC111820450Uncharacterized protein LOC111820450 isoform X1. (227 aa)
LOC101361171Nucleoporin Nup37 isoform X1. (326 aa)
LOC111820956Nuclease-sensitive element-binding protein 1-like. (74 aa)
LOC101353303Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (589 aa)
LOC101347999Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (334 aa)
LOC101351071NTF2-related export protein 2 isoform X1. (170 aa)
LOC101355525Importin subunit beta-1. (876 aa)
LOC101354584Nuclear cap-binding protein subunit 3 isoform X1. (627 aa)
LOC101360331Exportin-5 isoform X1. (1127 aa)
LOC101352367Heterogeneous nuclear ribonucleoproteins A2/B1. (353 aa)
LOC101345896THO complex subunit 2 isoform X1. (1628 aa)
LOC111821149LOW QUALITY PROTEIN: leucine zipper protein 4. (315 aa)
LOC101354601Ras GTPase-activating protein-binding protein 2 isoform X1. (482 aa)
LOC101346586Nucleoporin-62 C-terminal-like protein. (312 aa)
LOC101343717YTH domain-containing protein 1 isoform X1. (730 aa)
LOC101351905LOW QUALITY PROTEIN: polyribonucleotide nucleotidyltransferase 1, mitochondrial. (798 aa)
LOC101356593Exportin-1 isoform X1. (1071 aa)
LOC101356513Leucine-rich PPR motif-containing protein, mitochondrial isoform X1. (1395 aa)
LOC101355993SID1 transmembrane family member 2. (828 aa)
LOC101359743Nuclear pore complex protein Nup153. (1369 aa)
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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