37 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101347626	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	LOC101345172	MRG/MORF4L-binding protein. (203 aa)
	LOC101354304	MMS19 nucleotide excision repair protein homolog isoform X1. (1030 aa)
	LOC101362007	Chromatin modification-related protein MEAF6 isoform X1. (201 aa)
	LOC101357444	DNA methyltransferase 1-associated protein 1. (468 aa)
	LOC101357711	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1013 aa)
	LOC101355609	Telomerase Cajal body protein 1. (540 aa)
	LOC101341332	E3 SUMO-protein ligase PIAS4. (516 aa)
	LOC101360240	Hepatoma-derived growth factor-related protein 2. (674 aa)
	LOC101348443	Protein timeless homolog. (1204 aa)
	LOC101344396	KHDC3-like protein. (171 aa)
	LOC101355281	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (463 aa)
	LOC101344644	Oocyte-expressed protein homolog. (141 aa)
	LOC101359652	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (546 aa)
	LOC101347615	AT-rich interactive domain-containing protein 2 isoform X1. (1835 aa)
	LOC101359579	Inhibitor of growth protein. (418 aa)
	LOC101357666	RNA-binding protein FUS isoform X1. (522 aa)
	LOC101361716	MRN complex-interacting protein. (338 aa)
	LOC101345256	Vacuolar protein sorting-associated protein 72 homolog isoform X2. (374 aa)
	LOC101342461	Pogo transposable element with ZNF domain. (1413 aa)
	LOC105756529	RAD51-associated protein 1. (186 aa)
	LOC105756303	Actin-related protein 2. (106 aa)
	LOC101359785	Helicase POLQ-like isoform X1. (1062 aa)
	LOC111819422	E1A-binding protein p400-like. (535 aa)
	LOC111819440	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (124 aa)
	LOC101347998	Enhancer of polycomb homolog. (818 aa)
	LOC101348260	wiskott-Aldrich syndrome protein isoform X1. (534 aa)
	LOC101361607	WD repeat-containing protein 48. (672 aa)
	LOC101351950	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3854 aa)
	LOC101348095	MBT domain-containing protein 1 isoform X1. (654 aa)
	LOC101352923	Fanconi anemia group B protein isoform X1. (868 aa)
	LOC101357981	LOW QUALITY PROTEIN: bromodomain-containing protein 8. (1242 aa)
	LOC101342040	DNA excision repair protein ERCC-6 isoform X1. (1495 aa)
	LOC101355561	DNA endonuclease RBBP8 isoform X1. (899 aa)
	LOC101358086	E1A-binding protein p400. (2457 aa)
	LOC101354467	Enhancer of polycomb homolog. (874 aa)
	LOC101350416	YEATS domain-containing protein 4 isoform X1. (259 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101341332	LOC101357711	A0A2Y9DPP1	A0A2Y9DJR5	E3 SUMO-protein ligase PIAS4.	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	0.666
LOC101341332	LOC101359652	A0A2Y9DPP1	A0A2Y9E016	E3 SUMO-protein ligase PIAS4.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.404
LOC101342040	LOC101347626	A0A2Y9RTI0	A0A2Y9D5Z6	DNA excision repair protein ERCC-6 isoform X1.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.543
LOC101342040	LOC101351950	A0A2Y9RTI0	A0A2Y9R9G6	DNA excision repair protein ERCC-6 isoform X1.	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.	0.417
LOC101342040	LOC101355281	A0A2Y9RTI0	A0A2Y9DVC9	DNA excision repair protein ERCC-6 isoform X1.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.423
LOC101342040	LOC101357444	A0A2Y9RTI0	A0A2Y9DD52	DNA excision repair protein ERCC-6 isoform X1.	DNA methyltransferase 1-associated protein 1.	0.432
LOC101342040	LOC101362007	A0A2Y9RTI0	A0A2Y9DCB1	DNA excision repair protein ERCC-6 isoform X1.	Chromatin modification-related protein MEAF6 isoform X1.	0.435
LOC101344396	LOC101344644	A0A2Y9DUE4	A0A2Y9DVP8	KHDC3-like protein.	Oocyte-expressed protein homolog.	0.743
LOC101344644	LOC101344396	A0A2Y9DVP8	A0A2Y9DUE4	Oocyte-expressed protein homolog.	KHDC3-like protein.	0.743
LOC101345172	LOC101345256	A0A2Y9D954	A0A2Y9E9Q8	MRG/MORF4L-binding protein.	Vacuolar protein sorting-associated protein 72 homolog isoform X2.	0.938
LOC101345172	LOC101347626	A0A2Y9D954	A0A2Y9D5Z6	MRG/MORF4L-binding protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.929
LOC101345172	LOC101347998	A0A2Y9D954	A0A2Y9QRR7	MRG/MORF4L-binding protein.	Enhancer of polycomb homolog.	0.938
LOC101345172	LOC101348095	A0A2Y9D954	A0A2Y9R9K6	MRG/MORF4L-binding protein.	MBT domain-containing protein 1 isoform X1.	0.603
LOC101345172	LOC101350416	A0A2Y9D954	A0A2Y9RWZ9	MRG/MORF4L-binding protein.	YEATS domain-containing protein 4 isoform X1.	0.896
LOC101345172	LOC101351950	A0A2Y9D954	A0A2Y9R9G6	MRG/MORF4L-binding protein.	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.	0.967
LOC101345172	LOC101354467	A0A2Y9D954	A0A2Y9RVS6	MRG/MORF4L-binding protein.	Enhancer of polycomb homolog.	0.943
LOC101345172	LOC101355281	A0A2Y9D954	A0A2Y9DVC9	MRG/MORF4L-binding protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.907
LOC101345172	LOC101357444	A0A2Y9D954	A0A2Y9DD52	MRG/MORF4L-binding protein.	DNA methyltransferase 1-associated protein 1.	0.984
LOC101345172	LOC101357981	A0A2Y9D954	A0A2Y9RA77	MRG/MORF4L-binding protein.	LOW QUALITY PROTEIN: bromodomain-containing protein 8.	0.933
LOC101345172	LOC101358086	A0A2Y9D954	A0A2Y9RTT2	MRG/MORF4L-binding protein.	E1A-binding protein p400.	0.708