STRINGSTRING
LOC101342326 LOC101342326 TNF TNF LOC101358905 LOC101358905 LOC111819053 LOC111819053 LOC101343223 LOC101343223 LOC101345851 LOC101345851 LOC101346027 LOC101346027 LOC101358445 LOC101358445 LOC101350336 LOC101350336 LOC101349039 LOC101349039 LOC101351454 LOC101351454 LOC101345704 LOC101345704 LOC101355264 LOC101355264 LOC111822717 LOC111822717 LOC101351256 LOC101351256 LOC101343250 LOC101343250 LOC101345959 LOC101345959
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101342326Unconventional myosin-Ic; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1063 aa)
TNFTumor necrosis factor isoform X1; Belongs to the tumor necrosis factor family. (234 aa)
LOC101358905Junctional adhesion molecule A. (298 aa)
LOC111819053Rho-associated protein kinase 1-like. (93 aa)
LOC101343223Rho-associated protein kinase 1 isoform X1. (959 aa)
LOC101345851Zinc finger protein SNAI1. (266 aa)
LOC101346027Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (406 aa)
LOC101358445interleukin-17A. (153 aa)
LOC101350336LOW QUALITY PROTEIN: nephrocystin-4. (1422 aa)
LOC101349039Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (211 aa)
LOC101351454Nephrocystin-1. (688 aa)
LOC101345704Zinc finger protein SNAI2. (268 aa)
LOC101355264Ephrin type-A receptor 2. (977 aa)
LOC111822717Rho-associated protein kinase 1. (88 aa)
LOC101351256Inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1. (756 aa)
LOC101343250G-protein coupled bile acid receptor 1. (330 aa)
LOC101345959Rho-associated protein kinase 2 isoform X1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1405 aa)
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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