15 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101360794	Cohesin subunit SA-3. (1224 aa)
	LOC101348882	Testis-expressed protein 12. (123 aa)
	LOC101342520	Probable E3 SUMO-protein ligase RNF212. (121 aa)
	LOC101360549	Synaptonemal complex protein 2 isoform X3. (1570 aa)
	LOC101345179	Protein SIX6OS1. (584 aa)
	LOC101353757	Synaptonemal complex central element protein 3. (88 aa)
	LOC101342421	Synaptonemal complex protein 1 isoform X1. (978 aa)
	LOC101341844	Peptidylprolyl isomerase. (498 aa)
	LOC105756938	RING finger protein 212B. (278 aa)
	LOC101353569	Testis-expressed protein 11. (951 aa)
	LOC101340432	Meiosis-specific protein MEI4. (388 aa)
	LOC101342644	Synaptonemal complex central element protein 2. (183 aa)
	LOC111819460	Bloom syndrome protein-like. (280 aa)
	LOC101353885	LOW QUALITY PROTEIN: synaptonemal complex protein 2-like. (752 aa)
	LOC101356280	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (985 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101342421	LOC101353885	A0A2Y9DU36	A0A2Y9QP52	Synaptonemal complex protein 1 isoform X1.	LOW QUALITY PROTEIN: synaptonemal complex protein 2-like.	0.550
LOC101342520	LOC101353569	A0A2Y9RPB7	A0A2Y9FXT7	Probable E3 SUMO-protein ligase RNF212.	Testis-expressed protein 11.	0.572
LOC101342644	LOC101345179	A0A2Y9EA25	A0A2Y9DAD1	Synaptonemal complex central element protein 2.	Protein SIX6OS1.	0.588
LOC101342644	LOC101353757	A0A2Y9EA25	A0A2Y9DT32	Synaptonemal complex central element protein 2.	Synaptonemal complex central element protein 3.	0.853
LOC101342644	LOC101353885	A0A2Y9EA25	A0A2Y9QP52	Synaptonemal complex central element protein 2.	LOW QUALITY PROTEIN: synaptonemal complex protein 2-like.	0.420
LOC101342644	LOC101360549	A0A2Y9EA25	A0A2Y9DAA5	Synaptonemal complex central element protein 2.	Synaptonemal complex protein 2 isoform X3.	0.532
LOC101342644	LOC101360794	A0A2Y9EA25	A0A2Y9RQE6	Synaptonemal complex central element protein 2.	Cohesin subunit SA-3.	0.639
LOC101345179	LOC101342644	A0A2Y9DAD1	A0A2Y9EA25	Protein SIX6OS1.	Synaptonemal complex central element protein 2.	0.588
LOC101345179	LOC101353757	A0A2Y9DAD1	A0A2Y9DT32	Protein SIX6OS1.	Synaptonemal complex central element protein 3.	0.551
LOC101348882	LOC101353885	A0A2Y9DXT2	A0A2Y9QP52	Testis-expressed protein 12.	LOW QUALITY PROTEIN: synaptonemal complex protein 2-like.	0.428
LOC101353569	LOC101342520	A0A2Y9FXT7	A0A2Y9RPB7	Testis-expressed protein 11.	Probable E3 SUMO-protein ligase RNF212.	0.572
LOC101353569	LOC101353885	A0A2Y9FXT7	A0A2Y9QP52	Testis-expressed protein 11.	LOW QUALITY PROTEIN: synaptonemal complex protein 2-like.	0.457
LOC101353569	LOC101360549	A0A2Y9FXT7	A0A2Y9DAA5	Testis-expressed protein 11.	Synaptonemal complex protein 2 isoform X3.	0.468
LOC101353569	LOC105756938	A0A2Y9FXT7	A0A2Y9QGR3	Testis-expressed protein 11.	RING finger protein 212B.	0.513
LOC101353757	LOC101342644	A0A2Y9DT32	A0A2Y9EA25	Synaptonemal complex central element protein 3.	Synaptonemal complex central element protein 2.	0.853
LOC101353757	LOC101345179	A0A2Y9DT32	A0A2Y9DAD1	Synaptonemal complex central element protein 3.	Protein SIX6OS1.	0.551
LOC101353757	LOC101360549	A0A2Y9DT32	A0A2Y9DAA5	Synaptonemal complex central element protein 3.	Synaptonemal complex protein 2 isoform X3.	0.498
LOC101353757	LOC101360794	A0A2Y9DT32	A0A2Y9RQE6	Synaptonemal complex central element protein 3.	Cohesin subunit SA-3.	0.646
LOC101353885	LOC101342421	A0A2Y9QP52	A0A2Y9DU36	LOW QUALITY PROTEIN: synaptonemal complex protein 2-like.	Synaptonemal complex protein 1 isoform X1.	0.550
LOC101353885	LOC101342644	A0A2Y9QP52	A0A2Y9EA25	LOW QUALITY PROTEIN: synaptonemal complex protein 2-like.	Synaptonemal complex central element protein 2.	0.420