11 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101340741	Something about silencing protein 10. (478 aa)
	LOC101348807	U3 small nucleolar RNA-interacting protein 2. (518 aa)
	LOC101353879	rRNA-processing protein FCF1 homolog. (198 aa)
	LOC101361249	rRNA-processing protein UTP23 homolog. (249 aa)
	LOC101348080	Nucleolar protein 10 isoform X1. (687 aa)
	LOC101346733	DNA-dependent protein kinase catalytic subunit isoform X1; Belongs to the PI3/PI4-kinase family. (4134 aa)
	LOC101345741	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (381 aa)
	LOC101358623	Ribosomal RNA small subunit methyltransferase NEP1. (244 aa)
	LOC101351423	U3 small nucleolar RNA-associated protein 14 homolog A. (781 aa)
	LOC101358916	Small subunit processome component 20 homolog isoform X1. (2807 aa)
	LOC101351261	U3 small nucleolar RNA-associated protein 14 homolog A-like isoform X1. (766 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101340741	LOC101345741	A0A2Y9DZ79	A0A2Y9E1M1	Something about silencing protein 10.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
LOC101340741	LOC101348080	A0A2Y9DZ79	A0A2Y9DFC3	Something about silencing protein 10.	Nucleolar protein 10 isoform X1.	0.985
LOC101340741	LOC101348807	A0A2Y9DZ79	A0A2Y9D6F5	Something about silencing protein 10.	U3 small nucleolar RNA-interacting protein 2.	0.983
LOC101340741	LOC101351261	A0A2Y9DZ79	A0A2Y9RHP1	Something about silencing protein 10.	U3 small nucleolar RNA-associated protein 14 homolog A-like isoform X1.	0.986
LOC101340741	LOC101351423	A0A2Y9DZ79	A0A2Y9FXN7	Something about silencing protein 10.	U3 small nucleolar RNA-associated protein 14 homolog A.	0.986
LOC101340741	LOC101353879	A0A2Y9DZ79	A0A2Y9DB72	Something about silencing protein 10.	rRNA-processing protein FCF1 homolog.	0.997
LOC101340741	LOC101358623	A0A2Y9DZ79	A0A2Y9E577	Something about silencing protein 10.	Ribosomal RNA small subunit methyltransferase NEP1.	0.992
LOC101340741	LOC101358916	A0A2Y9DZ79	A0A2Y9QMK6	Something about silencing protein 10.	Small subunit processome component 20 homolog isoform X1.	0.995
LOC101340741	LOC101361249	A0A2Y9DZ79	A0A2Y9DF64	Something about silencing protein 10.	rRNA-processing protein UTP23 homolog.	0.891
LOC101345741	LOC101340741	A0A2Y9E1M1	A0A2Y9DZ79	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Something about silencing protein 10.	0.999
LOC101345741	LOC101348080	A0A2Y9E1M1	A0A2Y9DFC3	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Nucleolar protein 10 isoform X1.	0.996
LOC101345741	LOC101348807	A0A2Y9E1M1	A0A2Y9D6F5	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	U3 small nucleolar RNA-interacting protein 2.	0.995
LOC101345741	LOC101351261	A0A2Y9E1M1	A0A2Y9RHP1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	U3 small nucleolar RNA-associated protein 14 homolog A-like isoform X1.	0.970
LOC101345741	LOC101351423	A0A2Y9E1M1	A0A2Y9FXN7	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	U3 small nucleolar RNA-associated protein 14 homolog A.	0.970
LOC101345741	LOC101353879	A0A2Y9E1M1	A0A2Y9DB72	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	rRNA-processing protein FCF1 homolog.	0.998
LOC101345741	LOC101358623	A0A2Y9E1M1	A0A2Y9E577	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Ribosomal RNA small subunit methyltransferase NEP1.	0.999
LOC101345741	LOC101358916	A0A2Y9E1M1	A0A2Y9QMK6	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Small subunit processome component 20 homolog isoform X1.	0.999
LOC101345741	LOC101361249	A0A2Y9E1M1	A0A2Y9DF64	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	rRNA-processing protein UTP23 homolog.	0.994
LOC101348080	LOC101340741	A0A2Y9DFC3	A0A2Y9DZ79	Nucleolar protein 10 isoform X1.	Something about silencing protein 10.	0.985
LOC101348080	LOC101345741	A0A2Y9DFC3	A0A2Y9E1M1	Nucleolar protein 10 isoform X1.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.996