42 items (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101341642	Vesicle-fusing ATPase isoform X1. (803 aa)
	LOC101347660	Cytohesin-1 isoform X2. (400 aa)
	LOC101341756	Small integral membrane protein 10-like protein 2A. (78 aa)
	LOC101355790	Cytohesin-3. (351 aa)
	LOC101355127	Small integral membrane protein 7. (76 aa)
	LOC101341347	Golgi integral membrane protein 4 isoform X1. (715 aa)
	LOC101345486	Ras-related protein Rab-33B isoform X1. (242 aa)
	LOC101357921	Small integral membrane protein 10-like protein 1. (67 aa)
	LOC101340937	F-box only protein 8 isoform X1. (351 aa)
	LOC101348396	Syntaxin-16 isoform X1; Belongs to the syntaxin family. (322 aa)
	LOC101340947	Spermatogenesis-defective protein 39 homolog. (493 aa)
	LOC101351839	RAB6A-GEF complex partner protein 2. (548 aa)
	LOC101341722	Conserved oligomeric Golgi complex subunit 2 isoform X1. (738 aa)
	LOC101360222	RAB6A-GEF complex partner protein 1 isoform X1. (1420 aa)
	LOC101346040	Conserved oligomeric Golgi complex subunit 7. (770 aa)
	LOC101347584	Thyroid receptor-interacting protein 11-like. (557 aa)
	LOC101355684	Cytohesin-4 isoform X1. (431 aa)
	LOC101342400	Golgi SNAP receptor complex member 2 isoform X1; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
	LOC101342832	Conserved oligomeric Golgi complex subunit 1. (978 aa)
	LOC101344950	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (250 aa)
	LOC101352194	Beta-soluble NSF attachment protein isoform X1. (298 aa)
	LOC101360926	Thyroid receptor-interacting protein 11 isoform X1. (1981 aa)
	LOC101341069	Golgin subfamily A member 5 isoform X1. (732 aa)
	LOC101342605	Alpha-soluble NSF attachment protein isoform X1. (295 aa)
	LOC101360594	Cytohesin-2 isoform X1. (399 aa)
	LOC101361537	Ras-related protein Rab-39A. (217 aa)
	LOC101361633	Syntaxin-5 isoform X1; Belongs to the syntaxin family. (355 aa)
	LOC101354285	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (631 aa)
	LOC101345658	Gamma-soluble NSF attachment protein isoform X1. (312 aa)
	LOC101347111	Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family. (198 aa)
	LOC101356256	Synaptosomal-associated protein 29. (253 aa)
	LOC101360017	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (657 aa)
	LOC101341869	Conserved oligomeric Golgi complex subunit 4 isoform X2. (785 aa)
	LOC101340416	BET1-like protein. (111 aa)
	LOC101355924	Vacuolar protein sorting-associated protein 45 isoform X1; Belongs to the STXBP/unc-18/SEC1 family. (570 aa)
	LOC101352241	Syntaxin-10; Belongs to the syntaxin family. (249 aa)
	LOC101360429	Conserved oligomeric Golgi complex subunit 5 isoform X1. (829 aa)
	LOC101351440	Ras-related protein Rab-30. (203 aa)
	LOC101356293	Syntaxin-6 isoform X1; Belongs to the syntaxin family. (266 aa)
	LOC101347328	LOW QUALITY PROTEIN: thyroid receptor-interacting protein 11-like. (539 aa)
	LOC101347243	Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1. (217 aa)
	LOC101360580	Conserved oligomeric Golgi complex subunit 3 isoform X1. (840 aa)

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101340416	LOC101341642	A0A2Y9E9H0	A0A2Y9QV01	BET1-like protein.	Vesicle-fusing ATPase isoform X1.	0.800
LOC101340416	LOC101341722	A0A2Y9E9H0	A0A2Y9DEY3	BET1-like protein.	Conserved oligomeric Golgi complex subunit 2 isoform X1.	0.705
LOC101340416	LOC101341869	A0A2Y9E9H0	A0A2Y9E7R4	BET1-like protein.	Conserved oligomeric Golgi complex subunit 4 isoform X2.	0.642
LOC101340416	LOC101342400	A0A2Y9E9H0	A0A2Y9DGU8	BET1-like protein.	Golgi SNAP receptor complex member 2 isoform X1; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.995
LOC101340416	LOC101342605	A0A2Y9E9H0	A0A2Y9DUS7	BET1-like protein.	Alpha-soluble NSF attachment protein isoform X1.	0.761
LOC101340416	LOC101342832	A0A2Y9E9H0	A0A2Y9DH47	BET1-like protein.	Conserved oligomeric Golgi complex subunit 1.	0.592
LOC101340416	LOC101344950	A0A2Y9E9H0	A0A2Y9DKC2	BET1-like protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.985
LOC101340416	LOC101345486	A0A2Y9E9H0	A0A2Y9RV29	BET1-like protein.	Ras-related protein Rab-33B isoform X1.	0.466
LOC101340416	LOC101345658	A0A2Y9E9H0	A0A2Y9E296	BET1-like protein.	Gamma-soluble NSF attachment protein isoform X1.	0.675
LOC101340416	LOC101346040	A0A2Y9E9H0	A0A2Y9DF95	BET1-like protein.	Conserved oligomeric Golgi complex subunit 7.	0.573
LOC101340416	LOC101347111	A0A2Y9E9H0	A0A2Y9E2V5	BET1-like protein.	Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family.	0.987
LOC101340416	LOC101347243	A0A2Y9E9H0	A0A2Y9QQH8	BET1-like protein.	Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.	0.518
LOC101340416	LOC101348396	A0A2Y9E9H0	A0A2Y9D906	BET1-like protein.	Syntaxin-16 isoform X1; Belongs to the syntaxin family.	0.505
LOC101340416	LOC101352194	A0A2Y9E9H0	A0A2Y9DKX8	BET1-like protein.	Beta-soluble NSF attachment protein isoform X1.	0.761
LOC101340416	LOC101352241	A0A2Y9E9H0	A0A2Y9EAV8	BET1-like protein.	Syntaxin-10; Belongs to the syntaxin family.	0.400
LOC101340416	LOC101354285	A0A2Y9E9H0	A0A2Y9E0K9	BET1-like protein.	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	0.673
LOC101340416	LOC101355127	A0A2Y9E9H0	A0A2Y9RLM4	BET1-like protein.	Small integral membrane protein 7.	0.599
LOC101340416	LOC101356293	A0A2Y9E9H0	A0A2Y9QPB3	BET1-like protein.	Syntaxin-6 isoform X1; Belongs to the syntaxin family.	0.400
LOC101340416	LOC101360017	A0A2Y9E9H0	A0A2Y9E6U8	BET1-like protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.671
LOC101340416	LOC101360429	A0A2Y9E9H0	A0A2Y9FZ12	BET1-like protein.	Conserved oligomeric Golgi complex subunit 5 isoform X1.	0.587