STRINGSTRING
LOC101348677 LOC101348677 LOC101351338 LOC101351338 LOC101342174 LOC101342174 LOC101343239 LOC101343239 LOC101348388 LOC101348388 LOC101360545 LOC101360545 LOC101346760 LOC101346760 LOC101348346 LOC101348346
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101348677aspartate--tRNA ligase, cytoplasmic isoform X1. (501 aa)
LOC101351338SOSS complex subunit B1. (211 aa)
LOC101342174asparagine--tRNA ligase, cytoplasmic. (559 aa)
LOC101343239aspartate--tRNA ligase, mitochondrial. (654 aa)
LOC101348388Lysine--tRNA ligase. (625 aa)
LOC101360545CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (374 aa)
LOC101346760Probable asparagine--tRNA ligase, mitochondrial isoform X1. (477 aa)
LOC101348346Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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