STRINGSTRING
AK6 AK6 LOC101361479 LOC101361479 LOC101359681 LOC101359681 LOC101360294 LOC101360294 LOC101356696 LOC101356696 LOC101353879 LOC101353879 LOC101348659 LOC101348659 LOC101349005 LOC101349005 LOC101359170 LOC101359170 LOC101342818 LOC101342818 LOC101340891 LOC101340891 LOC101349180 LOC101349180 LOC101356292 LOC101356292 LOC101359442 LOC101359442 LOC101340627 LOC101340627 LOC101340701 LOC101340701 LOC101355092 LOC101355092 LOC101354926 LOC101354926 LOC101343508 LOC101343508 LOC101345974 LOC101345974 LOC101347843 LOC101347843 LOC101352277 LOC101352277 LOC101348098 LOC101348098 LOC101362036 LOC101362036 LOC101342175 LOC101342175 LOC101361106 LOC101361106 LOC101359378 LOC101359378 LOC101359637 LOC101359637 LOC101344796 LOC101344796 LOC101351612 LOC101351612 LOC101362056 LOC101362056 LOC101350914 LOC101350914 LOC101352218 LOC101352218 LOC101345055 LOC101345055 LOC101341267 LOC101341267 LOC101342529 LOC101342529 LOC101354611 LOC101354611 LOC101358623 LOC101358623 LOC101359583 LOC101359583 LOC101360963 LOC101360963 LOC101354123 LOC101354123 LOC101345001 LOC101345001 LOC101355402 LOC101355402 LOC101361916 LOC101361916 LOC101345345 LOC101345345 LOC101361085 LOC101361085 LOC101353745 LOC101353745 LOC101351423 LOC101351423 LOC101349184 LOC101349184 LOC101342413 LOC101342413 LOC101343677 LOC101343677 LOC101342572 LOC101342572 LOC101342657 LOC101342657 LOC101352332 LOC101352332 LOC101350263 LOC101350263 LOC101343412 LOC101343412 LOC101361927 LOC101361927 LOC101349241 LOC101349241 LOC101349090 LOC101349090 LOC101352427 LOC101352427 LOC101341638 LOC101341638 LOC101351843 LOC101351843 LOC111819696 LOC111819696 LOC101359001 LOC101359001 LOC101354075 LOC101354075 LOC101348159 LOC101348159 LOC101352883 LOC101352883 LOC101360589 LOC101360589 LOC101348269 LOC101348269 LOC101356593 LOC101356593 LOC101351261 LOC101351261 LOC101352143 LOC101352143 LOC101341941 LOC101341941 LOC101341345 LOC101341345 LOC101346010 LOC101346010 LOC101346595 LOC101346595 LOC101347378 LOC101347378 LOC101357166 LOC101357166 LOC101348293 LOC101348293 LOC101345830 LOC101345830
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AK6Adenylate kinase isoenzyme 6; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. May have a role in nuclear energy homeostasis. Has also ATPase activity. May be involved in regulation of Cajal body (CB) formation; Belongs to the adenylate kinase family. AK6 subfamily. (172 aa)
LOC101361479RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1026 aa)
LOC101359681Ribonuclease P protein subunit p30. (268 aa)
LOC101360294Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (153 aa)
LOC101356696Ribonucleases P/MRP protein subunit POP1. (1018 aa)
LOC101353879rRNA-processing protein FCF1 homolog. (198 aa)
LOC101348659U3 small nucleolar RNA-associated protein 4 homolog isoform X1. (686 aa)
LOC101349005Casein kinase II subunit alpha' isoform X1; Belongs to the protein kinase superfamily. (350 aa)
LOC101359170rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. (325 aa)
LOC101342818Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (727 aa)
LOC101340891Nucleolar protein 6. (1141 aa)
LOC101349180U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (676 aa)
LOC101356292HEAT repeat-containing protein 1 isoform X1. (2142 aa)
LOC101359442RNA 3'-terminal phosphate cyclase-like protein isoform X1. (373 aa)
LOC101340627U3 small nucleolar RNA-associated protein 15 homolog. (518 aa)
LOC101340701U3 small nucleolar ribonucleoprotein protein IMP3. (233 aa)
LOC101355092Serine/threonine-protein kinase RIO2. (552 aa)
LOC1013549265'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (950 aa)
LOC101343508WD repeat-containing protein 36. (895 aa)
LOC101345974WD repeat-containing protein 43. (679 aa)
LOC101347843U3 small nucleolar RNA-associated protein 18 homolog. (555 aa)
LOC101352277RNA exonuclease 1 homolog. (1176 aa)
LOC101348098Nucleolar protein 58 isoform X1. (533 aa)
LOC101362036Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (200 aa)
LOC101342175Ribosomal RNA-processing protein 7 homolog A. (279 aa)
LOC101361106Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC101359378H/ACA ribonucleoprotein complex subunit 3. (64 aa)
LOC101359637WD repeat-containing protein 3. (943 aa)
LOC101344796Ribosome maturation protein SBDS isoform X1. (250 aa)
LOC101351612Oligoribonuclease, mitochondrial isoform X1. (237 aa)
LOC101362056Nuclear RNA export factor 1 isoform X1. (617 aa)
LOC101350914RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (414 aa)
LOC10135221860S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (503 aa)
LOC101345055GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (235 aa)
LOC101341267Ribonuclease 3. (1373 aa)
LOC101342529U3 small nucleolar RNA-associated protein 6 homolog. (598 aa)
LOC101354611WD repeat-containing protein 75 isoform X1. (830 aa)
LOC101358623Ribosomal RNA small subunit methyltransferase NEP1. (244 aa)
LOC101359583Ribonuclease P protein subunit p40 isoform X1. (363 aa)
LOC101360963Spermatogenesis-associated protein 5 isoform X1. (892 aa)
LOC101354123U3 small nucleolar ribonucleoprotein protein IMP4. (291 aa)
LOC101345001Nuclear RNA export factor 2-like. (398 aa)
LOC101355402Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (563 aa)
LOC101361916Guanine nucleotide-binding protein-like 3-like protein isoform X1. (575 aa)
LOC101345345Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
LOC101361085Ribonuclease P protein subunit p25. (202 aa)
LOC101353745LOW QUALITY PROTEIN: ribonuclease P protein subunit p30-like. (333 aa)
LOC101351423U3 small nucleolar RNA-associated protein 14 homolog A. (781 aa)
LOC101349184RNA exonuclease 5. (766 aa)
LOC101342413Nuclear RNA export factor 3-like. (615 aa)
LOC101343677LOW QUALITY PROTEIN: nuclear RNA export factor 2-like. (551 aa)
LOC101342572Nuclear RNA export factor 2-like. (273 aa)
LOC101342657Nuclear RNA export factor 2-like. (381 aa)
LOC101352332Ribosome biogenesis protein BMS1 homolog. (1287 aa)
LOC101350263Casein kinase II subunit alpha isoform X1; Belongs to the protein kinase superfamily. (391 aa)
LOC101343412Nuclear RNA export factor 3-like. (562 aa)
LOC101361927H/ACA ribonucleoprotein complex subunit 4. (550 aa)
LOC101349241Guanine nucleotide-binding protein-like 3. (449 aa)
LOC101349090Ribonuclease P protein subunit p29. (177 aa)
LOC101352427Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...] (245 aa)
LOC101341638Nuclear RNA export factor 3. (600 aa)
LOC101351843Large subunit GTPase 1 homolog isoform X1. (658 aa)
LOC111819696U3 small nucleolar ribonucleoprotein protein IMP4-like. (209 aa)
LOC101359001Ribonuclease P protein subunit p25-like protein. (163 aa)
LOC101354075Nuclear valosin-containing protein-like isoform X1. (860 aa)
LOC101348159Transducin beta-like protein 3. (831 aa)
LOC101352883NTF2-related export protein 1. (140 aa)
LOC101360589Ribonuclease P protein subunit p38. (284 aa)
LOC101348269H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (228 aa)
LOC101356593Exportin-1 isoform X1. (1071 aa)
LOC101351261U3 small nucleolar RNA-associated protein 14 homolog A-like isoform X1. (766 aa)
LOC101352143Treacle protein. (1379 aa)
LOC1013419415'-3' exoribonuclease 1 isoform X4. (1731 aa)
LOC101341345RNA-binding protein 28 isoform X1. (754 aa)
LOC101346010Elongation factor-like GTPase 1 isoform X1. (1129 aa)
LOC101346595Periodic tryptophan protein 2 homolog. (650 aa)
LOC101347378Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5599 aa)
LOC101357166rRNA 2'-O-methyltransferase fibrillarin. (317 aa)
LOC101348293Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (634 aa)
LOC101345830Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences; Belongs to the histone-like Alba family. (140 aa)
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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