(44 nodes) Catalytic step 2 spliceosome network (Zymoseptoria tritici ST99CH3D7)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ZT3D7_G2014	Matrin-type domain-containing protein. (238 aa)
	ZT3D7_G11309	Uncharacterized protein. (613 aa)
	ZT3D7_G9922	Small nuclear ribonucleoprotein Sm D2. (122 aa)
	ZT3D7_G9823	Uncharacterized protein. (490 aa)
	ZT3D7_G9301	Uncharacterized protein. (841 aa)
	ZT3D7_G9359	Sm domain-containing protein. (89 aa)
	ZT3D7_G9004	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (163 aa)
	ZT3D7_G8320	Uncharacterized protein; Belongs to the DEAD box helicase family. (400 aa)
	ZT3D7_G8673	Uncharacterized protein. (283 aa)
	ZT3D7_G8656	PPIase cyclophilin-type domain-containing protein. (505 aa)
	ZT3D7_G8292	WD_REPEATS_REGION domain-containing protein. (325 aa)
	ZT3D7_G7673	Sm domain-containing protein. (207 aa)
	ZT3D7_G7633	Uncharacterized protein. (809 aa)
	ZT3D7_G7133	Uncharacterized protein. (310 aa)
	ZT3D7_G7277	Uncharacterized protein. (640 aa)
	ZT3D7_G7021	RRM domain-containing protein. (115 aa)
	ZT3D7_G6605	Uncharacterized protein. (936 aa)
	ZT3D7_G6461	Small nuclear ribonucleoprotein G. (91 aa)
	ZT3D7_G6417	Uncharacterized protein. (1024 aa)
	ZT3D7_G6256	Uncharacterized protein. (1910 aa)
	ZT3D7_G6099	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (187 aa)
	ZT3D7_G5987	Tr-type G domain-containing protein. (988 aa)
	ZT3D7_G5737	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
	ZT3D7_G5687	WD_REPEATS_REGION domain-containing protein. (502 aa)
	ZT3D7_G4968	WD_REPEATS_REGION domain-containing protein. (357 aa)
	ZT3D7_G4167	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1430 aa)
	ZT3D7_G4500	Uncharacterized protein. (318 aa)
	ZT3D7_G4212	RRM domain-containing protein. (392 aa)
	ZT3D7_G4005	Pinin_SDK_memA domain-containing protein. (238 aa)
	ZT3D7_G3701	Uncharacterized protein. (258 aa)
	ZT3D7_G3423	PSP domain-containing protein. (646 aa)
	ZT3D7_G3235	Sm domain-containing protein. (132 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
	ZT3D7_G1643	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
	ZT3D7_G1819	Uncharacterized protein. (678 aa)
	ZT3D7_G1576	Uncharacterized protein. (204 aa)
	ZT3D7_G1517	WD_REPEATS_REGION domain-containing protein. (509 aa)
	ZT3D7_G1520	RRM domain-containing protein. (147 aa)
	ZT3D7_G993	MI domain-containing protein. (758 aa)
	ZT3D7_G526	Uncharacterized protein. (266 aa)
	ZT3D7_G276	Uncharacterized protein. (267 aa)
	ZT3D7_G302	Uncharacterized protein. (206 aa)
	ZT3D7_G220	Uncharacterized protein. (493 aa)
	ZT3D7_G172	MPN domain-containing protein. (2366 aa)

Your Current Organism:

Zymoseptoria tritici ST99CH3D7

NCBI taxonomy Id: 1276538
Other names: Z. tritici ST99CH_3D7, Zymoseptoria tritici ST99CH_3D7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM3	ZT3D7_G11309	A0A1X7RKE0	A0A1X7S8Y4	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.945
LSM3	ZT3D7_G1517	A0A1X7RKE0	A0A1X7RGN9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	WD_REPEATS_REGION domain-containing protein.	0.573
LSM3	ZT3D7_G1576	A0A1X7RKE0	A0A1X7RGS8	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.990
LSM3	ZT3D7_G1643	A0A1X7RKE0	A0A1X7RHM1	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM3	ZT3D7_G172	A0A1X7RKE0	A0A1X7RC77	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	MPN domain-containing protein.	0.989
LSM3	ZT3D7_G1819	A0A1X7RKE0	A0A1X7RGZ0	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.950
LSM3	ZT3D7_G2014	A0A1X7RKE0	A0A1X7RIM9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Matrin-type domain-containing protein.	0.926
LSM3	ZT3D7_G276	A0A1X7RKE0	A0A1X7RCK7	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.931
LSM3	ZT3D7_G3235	A0A1X7RKE0	A0A1X7RL01	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.999
LSM3	ZT3D7_G3423	A0A1X7RKE0	A0A1X7RLE4	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PSP domain-containing protein.	0.925
LSM3	ZT3D7_G3701	A0A1X7RKE0	A0A1X7RMW5	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.715
LSM3	ZT3D7_G4212	A0A1X7RKE0	A0A1X7RPE4	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RRM domain-containing protein.	0.578
LSM3	ZT3D7_G4968	A0A1X7RKE0	A0A1X7RS74	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	WD_REPEATS_REGION domain-containing protein.	0.760
LSM3	ZT3D7_G5987	A0A1X7RKE0	A0A1X7RTR2	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Tr-type G domain-containing protein.	0.988
LSM3	ZT3D7_G6256	A0A1X7RKE0	A0A1X7RUH3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.921
LSM3	ZT3D7_G6461	A0A1X7RKE0	A0A1X7RV53	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein G.	0.990
LSM3	ZT3D7_G6605	A0A1X7RKE0	A0A1X7RVI2	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.962
LSM3	ZT3D7_G7021	A0A1X7RKE0	A0A1X7RWT4	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RRM domain-containing protein.	0.790
LSM3	ZT3D7_G7133	A0A1X7RKE0	A0A1X7RXJ9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.825
LSM3	ZT3D7_G7633	A0A1X7RKE0	A0A1X7RYZ9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.765