Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGC41788.1 | AGC42463.1 | MYSTI_00437 | MYSTI_01114 | Citrate synthase. | Succinate dehydrogenase cytochrome b558 subunit. | 0.706 |
| AGC41788.1 | AGC42731.1 | MYSTI_00437 | MYSTI_01383 | Citrate synthase. | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.994 |
| AGC41788.1 | AGC44385.1 | MYSTI_00437 | MYSTI_03069 | Citrate synthase. | Pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.959 |
| AGC41788.1 | AGC44968.1 | MYSTI_00437 | MYSTI_03662 | Citrate synthase. | Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.952 |
| AGC41788.1 | AGC45348.1 | MYSTI_00437 | MYSTI_04047 | Citrate synthase. | propionyl-CoA carboxylase subunit alpha; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.933 |
| AGC41788.1 | AGC45727.1 | MYSTI_00437 | MYSTI_04433 | Citrate synthase. | Succinate dehydrogenase iron-sulfur subunit. | 0.812 |
| AGC41788.1 | AGC45728.1 | MYSTI_00437 | MYSTI_04434 | Citrate synthase. | Succinate dehydrogenase flavoprotein subunit. | 0.698 |
| AGC41788.1 | AGC45730.1 | MYSTI_00437 | MYSTI_04436 | Citrate synthase. | Isocitrate dehydrogenase. | 0.856 |
| AGC41788.1 | AGC45749.1 | MYSTI_00437 | MYSTI_04455 | Citrate synthase. | Citrate synthase; Belongs to the citrate synthase family. | 0.928 |
| AGC41788.1 | AGC46790.1 | MYSTI_00437 | MYSTI_05513 | Citrate synthase. | 2-oxo acid dehydrogenase acyltransferase catalytic subunit. | 0.958 |
| AGC41788.1 | AGC47935.1 | MYSTI_00437 | MYSTI_06662 | Citrate synthase. | 2-oxoglutarate dehydrogenase E1 component. | 0.742 |
| AGC41788.1 | AGC47936.1 | MYSTI_00437 | MYSTI_06663 | Citrate synthase. | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.609 |
| AGC41788.1 | AGC48230.1 | MYSTI_00437 | MYSTI_06958 | Citrate synthase. | Putative isocitrate dehydrogenase, NAD-dependent. | 0.669 |
| AGC41788.1 | fumC | MYSTI_00437 | MYSTI_07035 | Citrate synthase. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.910 |
| AGC41788.1 | mdh | MYSTI_00437 | MYSTI_04435 | Citrate synthase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.978 |
| AGC41788.1 | pckG | MYSTI_00437 | MYSTI_01286 | Citrate synthase. | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. | 0.918 |
| AGC41788.1 | sucC | MYSTI_00437 | MYSTI_04432 | Citrate synthase. | succinyl-CoA synthase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.838 |
| AGC41788.1 | sucD | MYSTI_00437 | MYSTI_04431 | Citrate synthase. | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.726 |
| AGC42463.1 | AGC41788.1 | MYSTI_01114 | MYSTI_00437 | Succinate dehydrogenase cytochrome b558 subunit. | Citrate synthase. | 0.706 |
| AGC42463.1 | AGC42731.1 | MYSTI_01114 | MYSTI_01383 | Succinate dehydrogenase cytochrome b558 subunit. | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.410 |
page 1 of 18