STRINGSTRING
FFUJ_01402 FFUJ_01402 FFUJ_04088 FFUJ_04088 FFUJ_02860 FFUJ_02860 FFUJ_07200 FFUJ_07200 FFUJ_07984 FFUJ_07984 FFUJ_07926 FFUJ_07926
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_01402Related to ATP dependent RNA helicase. (2209 aa)
FFUJ_04088Probable ribosomal elongation factor EF-2. (983 aa)
FFUJ_02860Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
FFUJ_07200Probable pre-mRNA splicing factor prp1. (930 aa)
FFUJ_07984Probable U5 snRNP-specific 40 kD protein (Novel WD-40 repeat protein). (354 aa)
FFUJ_07926Probable splicing factor PRP8 (U5 snRNP). (3379 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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