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| | FFUJ_01846 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (188 aa) |
| | FFUJ_01736 | Related to plasma membrane phosphatase required for sodium stress response. (496 aa) |
| | FFUJ_14410 | HMG box domain-containing protein. (310 aa) |
| | FFUJ_01657 | Probable DNA-directed RNA polymerase II chain RPB3. (340 aa) |
| | FFUJ_01565 | Related to nasopharyngeal carcinoma susceptibility protein LZ16. (717 aa) |
| | FFUJ_01305 | Related to transcription initiation factor TFIIF subunit. (369 aa) |
| | FFUJ_01086 | Uncharacterized protein. (211 aa) |
| | FFUJ_01287 | Related to TAF(II) complex (TBP-associated protein complex) component. (232 aa) |
| | FFUJ_01314 | Related to DNA-directed RNA polymerase II chain. (158 aa) |
| | FFUJ_00985 | Related to C-type cyclin; Belongs to the cyclin family. (443 aa) |
| | FFUJ_01182 | Related to transcription initiation factor TFIID subunit. (493 aa) |
| | FFUJ_01119 | Probable transcription initiation factor IIB. (322 aa) |
| | FFUJ_00897 | Probable NHP6B-nonhistone chromosomal protein. (102 aa) |
| | FFUJ_00875 | Probable DNA-directed RNA polymerase. (381 aa) |
| | FFUJ_00711 | Probable DNA-directed RNA polymerase II chain RPB10. (80 aa) |
| | FFUJ_00929 | Uncharacterized protein. (458 aa) |
| | FFUJ_00805 | Related to Elongin C transcription elongation factor; Belongs to the SKP1 family. (110 aa) |
| | FFUJ_00590 | Related to transcription factor TFIIA-L. (400 aa) |
| | FFUJ_01734 | Uncharacterized protein. (348 aa) |
| | FFUJ_00083 | Uncharacterized protein. (604 aa) |
| | FFUJ_01138 | Uncharacterized protein. (697 aa) |
| | FFUJ_00769 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1157 aa) |
| | FFUJ_00732 | Related to transcription elongation factor TFIIS. (309 aa) |
| | FFUJ_00607 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (633 aa) |
| | FFUJ_01036 | Uncharacterized protein. (407 aa) |
| | FFUJ_00821 | Related to DRPLA protein. (550 aa) |
| | FFUJ_00114 | Uncharacterized protein. (2244 aa) |
| | FFUJ_05285 | Uncharacterized protein. (1712 aa) |
| | FFUJ_00736 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1750 aa) |
| | FFUJ_00679 | Related to TFIID and SAGA subunit. (253 aa) |
| | FFUJ_04765 | Uncharacterized protein. (380 aa) |
| | FFUJ_00509 | Related to Het-c protein. (919 aa) |
| | FFUJ_04750 | Probable DNA-directed RNA polymerase chain RPB5. (236 aa) |
| | FFUJ_00458 | DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (383 aa) |
| | FFUJ_01306 | Uncharacterized protein. (382 aa) |
| | FFUJ_04738 | SAP30_Sin3_bdg domain-containing protein. (175 aa) |
| | FFUJ_04729 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (122 aa) |
| | FFUJ_04541 | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (115 aa) |
| | FFUJ_04921 | Related to DNA-directed RNA polymerase II accessory protein. (409 aa) |
| | FFUJ_04052 | Related to transcription initiation factor IID 250K chain splice form 2. (1301 aa) |
| | FFUJ_02111 | Uncharacterized protein. (253 aa) |
| | FFUJ_02305 | Uncharacterized protein. (550 aa) |
| | FFUJ_01413 | Probable DNA-directed RNA polymerase II chain Rpb7. (172 aa) |
| | FFUJ_02445 | Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (119 aa) |
| | FFUJ_02392 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1047 aa) |
| | FFUJ_02418 | mRNA_triPase domain-containing protein. (850 aa) |
| | FFUJ_02458 | B-block_TFIIIC domain-containing protein. (1946 aa) |
| | FFUJ_04255 | Related to TSM1-component of TFIID complex. (1499 aa) |
| | FFUJ_02496 | Probable cyclin-dependent ser/thr protein kinase KIN28; Belongs to the protein kinase superfamily. (424 aa) |
| | FFUJ_05089 | Uncharacterized protein. (290 aa) |
| | FFUJ_02535 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (123 aa) |
| | FFUJ_02764 | Related to RNA Polymerase I Transcription Factor Rrn3. (688 aa) |
| | FFUJ_02915 | Related to tetratricopeptide repeat protein tpr1. (1212 aa) |
| | FFUJ_04842 | Uncharacterized protein. (317 aa) |
| | FFUJ_03914 | Related to TFB3-TFIIH subunit (Transcription/repair factor). (363 aa) |
| | FFUJ_02911 | mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (389 aa) |
| | FFUJ_02927 | Probable DNA-directed RNA polymerase I/III chain AC19. (162 aa) |
| | FFUJ_03814 | Uncharacterized protein. (281 aa) |
| | FFUJ_03077 | Related to cell division cycle 2-related protein kinase 7. (994 aa) |
| | FFUJ_03102 | SANT domain-containing protein. (576 aa) |
| | FFUJ_03168 | Related to DNA-directed RNA polymerase II regulator. (475 aa) |
| | FFUJ_03180 | Probable DNA helicase RAD25. (825 aa) |
| | FFUJ_03300 | Related to transcription factor IIIA. (500 aa) |
| | FFUJ_03666 | Related to hard surface induced protein 3. (429 aa) |
| | FFUJ_03846 | Uncharacterized protein. (269 aa) |
| | FFUJ_02891 | Related to transcription initiation factor. (292 aa) |
| | FFUJ_13236 | Related to general RNA polymerase II transcription factor TAF12. (688 aa) |
| | FFUJ_13459 | Related to TFIID subunit TAF19. (163 aa) |
| | FFUJ_03301 | Probable DNA-directed RNA polymerase I, II, III 18kD subunit. (154 aa) |
| | FFUJ_03478 | Related to DNA-directed RNA polymerase II chain RPB9. (186 aa) |
| | FFUJ_02510 | Related to cyclin dependent kinase C. (534 aa) |
| | FFUJ_14936 | Uncharacterized protein. (514 aa) |
| | FFUJ_06721 | Uncharacterized protein. (453 aa) |
| | FFUJ_03053 | Related to DNA-directed RNA polymerase 13.3K chain. (136 aa) |
| | FFUJ_13195 | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (468 aa) |
| | FFUJ_03206 | Related to CTD kinase subunit gamma. (258 aa) |
| | FFUJ_07180 | Related to DNA repair protein RAD26. (1030 aa) |
| | FFUJ_07406 | Probable transcription elongation complex subunit (CDC68). (1032 aa) |
| | FFUJ_07543 | Related to Pol II transcription elongation factor. (598 aa) |
| | FFUJ_07514 | Uncharacterized protein. (750 aa) |
| | FFUJ_13015 | Related to transcription initiation factor IID beta chain. (320 aa) |
| | FFUJ_13159 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (342 aa) |
| | FFUJ_13165 | Uncharacterized protein. (203 aa) |
| | FFUJ_14311 | Uncharacterized protein. (409 aa) |
| | FFUJ_07996 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1270 aa) |
| | FFUJ_07871 | Uncharacterized protein. (851 aa) |
| | FFUJ_07907 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (564 aa) |
| | FFUJ_07438 | Methyltranfer_dom domain-containing protein. (279 aa) |
| | FFUJ_07451 | Related to microtubule-interacting protein. (480 aa) |
| | FFUJ_05579 | Transcription factor IWS1. (428 aa) |
| | FFUJ_06349 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (496 aa) |
| | FFUJ_06623 | Uncharacterized protein. (305 aa) |
| | FFUJ_06086 | Probable transcription initiation factor TFIID. (254 aa) |
| | FFUJ_08952 | Related to TATA-binding protein-associated-factor. (463 aa) |
| | FFUJ_07370 | Probable RNA polymerase II transcription factor B subunit 5. (71 aa) |
| | FFUJ_08840 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1426 aa) |
| | FFUJ_07556 | Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1406 aa) |
| | FFUJ_08777 | RTR1-type domain-containing protein. (268 aa) |
| | FFUJ_07591 | TAF8_C domain-containing protein. (303 aa) |
| | FFUJ_07603 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1450 aa) |
| | FFUJ_06066 | mRNA cap guanine-N7 methyltransferase. (477 aa) |
| | FFUJ_06127 | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (304 aa) |
| | FFUJ_06221 | Uncharacterized protein. (538 aa) |
| | FFUJ_08682 | Related to DNA-directed RNA polymerase A (I) chain. (439 aa) |
| | FFUJ_05948 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (110 aa) |
| | FFUJ_09111 | Protein kinase domain-containing protein. (840 aa) |
| | FFUJ_13897 | Related to cyclin CCL1. (348 aa) |
| | FFUJ_08870 | Related to CTK2 Carboxy-terminal domain (CTD) kinase, beta subunit. (419 aa) |
| | FFUJ_12170 | Uncharacterized protein. (484 aa) |
| | FFUJ_08763 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1232 aa) |
| | FFUJ_12219 | Related to transcription initiation factor IIE chain TFA1. (375 aa) |
| | FFUJ_12393 | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (769 aa) |
| | FFUJ_13741 | Related to transcription initiation factor tfiid 100 kDa subunit. (720 aa) |
| | FFUJ_06034 | Uncharacterized protein. (578 aa) |
| | FFUJ_08363 | RPOL4c domain-containing protein. (150 aa) |
| | FFUJ_08341 | Related to basic transcription factor 2 (35 kd SU). (358 aa) |
| | FFUJ_06268 | Related to myosin heavy chain. (2396 aa) |
| | FFUJ_12833 | Uncharacterized protein. (259 aa) |
| | FFUJ_08737 | Related to RPC25-DNA-direcred RNA polymerase III, 25 KD subunit. (193 aa) |
| | FFUJ_08498 | Related to transcription initiation factor TFIIIC. (960 aa) |
| | FFUJ_05658 | Uncharacterized protein. (313 aa) |
| | FFUJ_09957 | Related to dna-dependent rna polymerase I subunit a43 (Rpa43). (463 aa) |
| | FFUJ_12182 | Related to oxidoreductase related to nitroreductase. (205 aa) |
| | FFUJ_12252 | Uncharacterized protein. (591 aa) |
| | FFUJ_12389 | Related to CHL1-protein of the DEAH box family. (864 aa) |
| | FFUJ_09554 | Related to transcription initiation factor IIF 30K chain. (245 aa) |
| | FFUJ_09750 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1676 aa) |
| | FFUJ_09731 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa) |
| | FFUJ_09720 | Related to transcription initiation factor TFIIF large subunit. (665 aa) |
| | FFUJ_09596 | Related to peroxisomal serine-active lipase. (634 aa) |
| | FFUJ_09495 | Uncharacterized protein. (309 aa) |
| | FFUJ_09462 | Related to DNA-directed RNA polymerase small Zn-binding chain. (72 aa) |
| | FFUJ_09754 | Probable excision repair protein rhp3. (786 aa) |
| | FFUJ_09409 | Related to transcription factor IIIB. (753 aa) |
| | FFUJ_10241 | Related to scytalone dehydratase. (176 aa) |
| | FFUJ_09270 | Uncharacterized protein. (620 aa) |
| | FFUJ_09769 | Related to RNA polymerase II transcription factor. (643 aa) |
| | FFUJ_09613 | Uncharacterized protein. (369 aa) |
| | FFUJ_10756 | Uncharacterized protein. (290 aa) |
| | FFUJ_10879 | Related to integral membrane protein. (383 aa) |
| | FFUJ_12706 | Methyltransf_25 domain-containing protein. (255 aa) |
| | FFUJ_12767 | F-box domain-containing protein. (526 aa) |
| | FFUJ_11249 | F-box domain-containing protein. (494 aa) |
| | FFUJ_12916 | Uncharacterized protein. (520 aa) |
| | FFUJ_10044 | Uncharacterized protein. (4489 aa) |
| | FFUJ_11579 | G_PROTEIN_RECEP_F1_2 domain-containing protein. (479 aa) |
| | FFUJ_11108 | F-box domain-containing protein. (511 aa) |
| | FFUJ_09612 | DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (265 aa) |
| | FFUJ_09480 | Uncharacterized protein. (706 aa) |
| | FFUJ_14218 | Uncharacterized protein. (228 aa) |
| | FFUJ_10755 | Related to ARCA protein. (537 aa) |
| | FFUJ_11451 | BTB domain-containing protein. (279 aa) |
