5 items (Fusarium fujikuroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FFUJ_05005	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (320 aa)
	FFUJ_04108	Probable ribose-phosphate diphosphokinase catalytic chain I. (323 aa)
	FFUJ_12546	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (328 aa)
	FFUJ_08362	Probable PRS5-ribose-phosphate pyrophosphokinases. (461 aa)
	FFUJ_09717	Probable PRS1-ribose-phosphate pyrophosphokinase. (503 aa)

Your Current Organism:

Fusarium fujikuroi

NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FFUJ_04108	FFUJ_05005	S0DXC4	S0DTC1	Probable ribose-phosphate diphosphokinase catalytic chain I.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.883
FFUJ_04108	FFUJ_08362	S0DXC4	S0EGR4	Probable ribose-phosphate diphosphokinase catalytic chain I.	Probable PRS5-ribose-phosphate pyrophosphokinases.	0.875
FFUJ_04108	FFUJ_09717	S0DXC4	S0EHI9	Probable ribose-phosphate diphosphokinase catalytic chain I.	Probable PRS1-ribose-phosphate pyrophosphokinase.	0.967
FFUJ_04108	FFUJ_12546	S0DXC4	S0ECQ1	Probable ribose-phosphate diphosphokinase catalytic chain I.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.883
FFUJ_05005	FFUJ_04108	S0DTC1	S0DXC4	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Probable ribose-phosphate diphosphokinase catalytic chain I.	0.883
FFUJ_05005	FFUJ_08362	S0DTC1	S0EGR4	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Probable PRS5-ribose-phosphate pyrophosphokinases.	0.888
FFUJ_05005	FFUJ_09717	S0DTC1	S0EHI9	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Probable PRS1-ribose-phosphate pyrophosphokinase.	0.887
FFUJ_05005	FFUJ_12546	S0DTC1	S0ECQ1	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.805
FFUJ_08362	FFUJ_04108	S0EGR4	S0DXC4	Probable PRS5-ribose-phosphate pyrophosphokinases.	Probable ribose-phosphate diphosphokinase catalytic chain I.	0.875
FFUJ_08362	FFUJ_05005	S0EGR4	S0DTC1	Probable PRS5-ribose-phosphate pyrophosphokinases.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.888
FFUJ_08362	FFUJ_09717	S0EGR4	S0EHI9	Probable PRS5-ribose-phosphate pyrophosphokinases.	Probable PRS1-ribose-phosphate pyrophosphokinase.	0.969
FFUJ_08362	FFUJ_12546	S0EGR4	S0ECQ1	Probable PRS5-ribose-phosphate pyrophosphokinases.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.883
FFUJ_09717	FFUJ_04108	S0EHI9	S0DXC4	Probable PRS1-ribose-phosphate pyrophosphokinase.	Probable ribose-phosphate diphosphokinase catalytic chain I.	0.967
FFUJ_09717	FFUJ_05005	S0EHI9	S0DTC1	Probable PRS1-ribose-phosphate pyrophosphokinase.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.887
FFUJ_09717	FFUJ_08362	S0EHI9	S0EGR4	Probable PRS1-ribose-phosphate pyrophosphokinase.	Probable PRS5-ribose-phosphate pyrophosphokinases.	0.969
FFUJ_09717	FFUJ_12546	S0EHI9	S0ECQ1	Probable PRS1-ribose-phosphate pyrophosphokinase.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.883
FFUJ_12546	FFUJ_04108	S0ECQ1	S0DXC4	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Probable ribose-phosphate diphosphokinase catalytic chain I.	0.883
FFUJ_12546	FFUJ_05005	S0ECQ1	S0DTC1	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.805
FFUJ_12546	FFUJ_08362	S0ECQ1	S0EGR4	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Probable PRS5-ribose-phosphate pyrophosphokinases.	0.883
FFUJ_12546	FFUJ_09717	S0ECQ1	S0EHI9	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	Probable PRS1-ribose-phosphate pyrophosphokinase.	0.883