STRINGSTRING
FFUJ_01879 FFUJ_01879 FFUJ_01806 FFUJ_01806 FFUJ_01528 FFUJ_01528 FFUJ_01591 FFUJ_01591 FFUJ_01081 FFUJ_01081 FFUJ_00703 FFUJ_00703 FFUJ_00702 FFUJ_00702 FFUJ_00399 FFUJ_00399 NOP7 NOP7 FFUJ_01325 FFUJ_01325 FFUJ_00916 FFUJ_00916 FFUJ_04735 FFUJ_04735 FFUJ_01377 FFUJ_01377 FFUJ_01317 FFUJ_01317 FFUJ_04578 FFUJ_04578 FFUJ_04758 FFUJ_04758 FFUJ_00365 FFUJ_00365 FFUJ_04754 FFUJ_04754 FFUJ_01367 FFUJ_01367 FFUJ_05011 FFUJ_05011 FFUJ_04983 FFUJ_04983 FFUJ_02358 FFUJ_02358 FFUJ_05132 FFUJ_05132 FFUJ_02478 FFUJ_02478 FFUJ_02899 FFUJ_02899 YTM1 YTM1 FFUJ_03277 FFUJ_03277 FFUJ_03204 FFUJ_03204 FFUJ_03362 FFUJ_03362 SPB1 SPB1 FFUJ_02465 FFUJ_02465 FFUJ_03260 FFUJ_03260 FFUJ_02585 FFUJ_02585 FFUJ_02815 FFUJ_02815 FFUJ_03079 FFUJ_03079 FFUJ_13431 FFUJ_13431 FFUJ_13583 FFUJ_13583 FFUJ_13507 FFUJ_13507 FFUJ_13679 FFUJ_13679 FFUJ_02739 FFUJ_02739 FFUJ_03095 FFUJ_03095 FFUJ_13308 FFUJ_13308 FFUJ_13477 FFUJ_13477 FFUJ_14647 FFUJ_14647 ERB1 ERB1 FFUJ_13352 FFUJ_13352 FFUJ_07649 FFUJ_07649 FFUJ_05895 FFUJ_05895 FFUJ_08717 FFUJ_08717 FFUJ_08872 FFUJ_08872 FFUJ_07902 FFUJ_07902 FFUJ_07806 FFUJ_07806 FFUJ_08596 FFUJ_08596 FFUJ_09788 FFUJ_09788 FFUJ_09789 FFUJ_09789 FFUJ_08595 FFUJ_08595 FFUJ_09452 FFUJ_09452 FFUJ_09815 FFUJ_09815 FFUJ_08302 FFUJ_08302 FFUJ_10363 FFUJ_10363 FFUJ_10362 FFUJ_10362 FFUJ_10513 FFUJ_10513 FFUJ_09464 FFUJ_09464 FFUJ_09860 FFUJ_09860
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_01879Probable ATP dependent RNA helicase. (1039 aa)
FFUJ_01806Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (740 aa)
FFUJ_01528Related to MAK21-protein required for 60S ribosomal subunit biogenesis. (981 aa)
FFUJ_01591Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (618 aa)
FFUJ_01081Probable DNA polymerase V. (990 aa)
FFUJ_00703Related to MRD1. (857 aa)
FFUJ_00702TEA domain-containing protein. (859 aa)
FFUJ_00399Related to excision repair protein RAD4. (781 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (661 aa)
FFUJ_01325Probable NSA2-involved in biogenesis of ribosomal large subunit. (260 aa)
FFUJ_00916Related to nuM1, hnRNP protein. (549 aa)
FFUJ_04735ATP-dependent RNA helicase DBP10. (897 aa)
FFUJ_01377Related to nuclear GTPase. (544 aa)
FFUJ_01317Related to PUF6 Member of the PUF protein family. (683 aa)
FFUJ_04578Related to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (749 aa)
FFUJ_04758Related to ATP dependent RNA helicase; Belongs to the DEAD box helicase family. (742 aa)
FFUJ_00365Related to WD-repeat protein CRB3. (428 aa)
FFUJ_04754Related to tRNA (Cytosine-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (851 aa)
FFUJ_01367Probable RNA binding protein Rpf2 involved in ribosome biogenesis. (317 aa)
FFUJ_05011Probable dead-box protein CYT-19; Belongs to the DEAD box helicase family. (675 aa)
FFUJ_04983Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
FFUJ_02358Uncharacterized protein. (373 aa)
FFUJ_05132Probable WD40-repeat protein (Notchless protein). (515 aa)
FFUJ_02478Uncharacterized protein. (212 aa)
FFUJ_0289960S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (475 aa)
FFUJ_03277Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (244 aa)
FFUJ_03204Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4910 aa)
FFUJ_03362Probable ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (794 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (830 aa)
FFUJ_02465Related to rRNA processing protein EBP2. (410 aa)
FFUJ_03260Related to 60S ribosomal protein L24. (220 aa)
FFUJ_02585rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (119 aa)
FFUJ_02815Probable Nucleolar protein 9. (762 aa)
FFUJ_03079Related to 60S ribosomal subunit assembly/export protein LOC1. (195 aa)
FFUJ_13431Protein MAK16; Belongs to the MAK16 family. (319 aa)
FFUJ_13583Related to RRP14-involved in ribosomal RNA processing. (559 aa)
FFUJ_13507Uncharacterized protein. (718 aa)
FFUJ_13679Related to BUD20 Protein involved in bud-site selection. (119 aa)
FFUJ_02739Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (199 aa)
FFUJ_03095Related to NOL1R protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (606 aa)
FFUJ_13308Related to RRP15 Essential protein involved in pre-rRNA processing. (300 aa)
FFUJ_13477Probable nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (679 aa)
FFUJ_14647Uncharacterized protein. (357 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (766 aa)
FFUJ_13352Related to NOP16 constituent of 66S pre-ribosomal particles. (215 aa)
FFUJ_07649Probable ATP dependent RNA helicase. (614 aa)
FFUJ_05895Related to fruit fly brahma transcriptional activator. (342 aa)
FFUJ_08717Related to MAK11 protein (Maintenance of killer toxin-encoding satellite M1 dsRNA). (488 aa)
FFUJ_08872annotation not available (374 aa)
FFUJ_07902Related to nucleolar protein NOP4 (NOP77). (737 aa)
FFUJ_07806Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (439 aa)
FFUJ_08596Related to RNA processing factor 1. (415 aa)
FFUJ_09788F-box domain-containing protein. (431 aa)
FFUJ_09789Probable BRX1 Nucleolar protein involved in the assembly of the large ribosomal subunit. (307 aa)
FFUJ_08595Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (667 aa)
FFUJ_09452Related to mating protein SSF1. (454 aa)
FFUJ_09815RNA helicase. (587 aa)
FFUJ_08302RNA helicase. (635 aa)
FFUJ_10363Related to RNA helicase MSS116; Belongs to the DEAD box helicase family. (607 aa)
FFUJ_10362HeLo domain-containing protein. (573 aa)
FFUJ_10513Uncharacterized protein. (135 aa)
FFUJ_09464Related to RRP1 protein. (239 aa)
FFUJ_09860Related to RNA binding protein. (373 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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