(6 nodes) Nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay network (Fusarium fujikuroi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FFUJ_08593	Uncharacterized protein. (239 aa)
	FFUJ_04538	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (177 aa)
	FFUJ_04278	Uncharacterized protein. (160 aa)
	FFUJ_13469	Related to Ribonuclease III. (344 aa)
	FFUJ_07890	Uncharacterized protein. (270 aa)
	FFUJ_06151	Related to ribonuclease P chain POP1. (904 aa)

Your Current Organism:

Fusarium fujikuroi

NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FFUJ_04278	FFUJ_04538	S0DPX5	S0DNU2	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.997
FFUJ_04278	FFUJ_06151	S0DPX5	S0E687	Uncharacterized protein.	Related to ribonuclease P chain POP1.	0.998
FFUJ_04278	FFUJ_07890	S0DPX5	S0E3D6	Uncharacterized protein.	Uncharacterized protein.	0.994
FFUJ_04278	FFUJ_08593	S0DPX5	S0E9J6	Uncharacterized protein.	Uncharacterized protein.	0.991
FFUJ_04538	FFUJ_04278	S0DNU2	S0DPX5	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Uncharacterized protein.	0.997
FFUJ_04538	FFUJ_06151	S0DNU2	S0E687	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Related to ribonuclease P chain POP1.	0.998
FFUJ_04538	FFUJ_07890	S0DNU2	S0E3D6	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Uncharacterized protein.	0.996
FFUJ_04538	FFUJ_08593	S0DNU2	S0E9J6	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	Uncharacterized protein.	0.993
FFUJ_06151	FFUJ_04278	S0E687	S0DPX5	Related to ribonuclease P chain POP1.	Uncharacterized protein.	0.998
FFUJ_06151	FFUJ_04538	S0E687	S0DNU2	Related to ribonuclease P chain POP1.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.998
FFUJ_06151	FFUJ_07890	S0E687	S0E3D6	Related to ribonuclease P chain POP1.	Uncharacterized protein.	0.997
FFUJ_06151	FFUJ_08593	S0E687	S0E9J6	Related to ribonuclease P chain POP1.	Uncharacterized protein.	0.993
FFUJ_07890	FFUJ_04278	S0E3D6	S0DPX5	Uncharacterized protein.	Uncharacterized protein.	0.994
FFUJ_07890	FFUJ_04538	S0E3D6	S0DNU2	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.996
FFUJ_07890	FFUJ_06151	S0E3D6	S0E687	Uncharacterized protein.	Related to ribonuclease P chain POP1.	0.997
FFUJ_07890	FFUJ_08593	S0E3D6	S0E9J6	Uncharacterized protein.	Uncharacterized protein.	0.995
FFUJ_08593	FFUJ_04278	S0E9J6	S0DPX5	Uncharacterized protein.	Uncharacterized protein.	0.991
FFUJ_08593	FFUJ_04538	S0E9J6	S0DNU2	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.993
FFUJ_08593	FFUJ_06151	S0E9J6	S0E687	Uncharacterized protein.	Related to ribonuclease P chain POP1.	0.993
FFUJ_08593	FFUJ_07890	S0E9J6	S0E3D6	Uncharacterized protein.	Uncharacterized protein.	0.995