STRINGSTRING
FFUJ_01851 FFUJ_01851 FFUJ_01347 FFUJ_01347 FFUJ_01314 FFUJ_01314 FFUJ_01031 FFUJ_01031 FFUJ_00839 FFUJ_00839 FFUJ_01671 FFUJ_01671 FFUJ_01279 FFUJ_01279 FFUJ_01854 FFUJ_01854 FFUJ_01932 FFUJ_01932 FFUJ_00391 FFUJ_00391 FFUJ_04538 FFUJ_04538 FFUJ_04690 FFUJ_04690 FFUJ_04307 FFUJ_04307 FFUJ_04176 FFUJ_04176 FFUJ_04278 FFUJ_04278 FFUJ_04159 FFUJ_04159 FFUJ_03829 FFUJ_03829 FFUJ_03828 FFUJ_03828 FFUJ_03827 FFUJ_03827 FFUJ_04843 FFUJ_04843 FFUJ_01413 FFUJ_01413 FFUJ_04249 FFUJ_04249 FFUJ_02618 FFUJ_02618 FFUJ_04008 FFUJ_04008 FFUJ_02905 FFUJ_02905 FFUJ_03836 FFUJ_03836 LSM4 LSM4 FFUJ_03273 FFUJ_03273 FFUJ_04334 FFUJ_04334 FFUJ_03071 FFUJ_03071 FFUJ_03835 FFUJ_03835 FFUJ_13241 FFUJ_13241 LSM5 LSM5 FFUJ_13469 FFUJ_13469 FFUJ_13635 FFUJ_13635 FFUJ_02621 FFUJ_02621 FFUJ_14777 FFUJ_14777 FFUJ_13559 FFUJ_13559 FFUJ_07298 FFUJ_07298 FFUJ_07502 FFUJ_07502 FFUJ_07533 FFUJ_07533 FFUJ_07706 FFUJ_07706 FFUJ_13227 FFUJ_13227 FFUJ_13255 FFUJ_13255 FFUJ_07890 FFUJ_07890 FFUJ_07095 FFUJ_07095 FFUJ_13467 FFUJ_13467 FFUJ_05641 FFUJ_05641 FFUJ_05597 FFUJ_05597 FFUJ_05717 FFUJ_05717 PAN3 PAN3 FFUJ_05919 FFUJ_05919 FFUJ_06165 FFUJ_06165 FFUJ_06170 FFUJ_06170 FFUJ_06037 FFUJ_06037 FFUJ_06234 FFUJ_06234 FFUJ_06167 FFUJ_06167 FFUJ_06151 FFUJ_06151 FFUJ_07458 FFUJ_07458 FFUJ_05612 FFUJ_05612 PAN2 PAN2 FFUJ_07457 FFUJ_07457 FFUJ_08655 FFUJ_08655 FFUJ_08644 FFUJ_08644 FFUJ_08623 FFUJ_08623 FFUJ_08513 FFUJ_08513 FFUJ_07942 FFUJ_07942 FFUJ_08593 FFUJ_08593 FFUJ_08321 FFUJ_08321 FFUJ_05420 FFUJ_05420 FFUJ_12211 FFUJ_12211 FFUJ_13833 FFUJ_13833 FFUJ_05892 FFUJ_05892 FFUJ_08546 FFUJ_08546 FFUJ_13777 FFUJ_13777 FFUJ_08535 FFUJ_08535 LSM1 LSM1 FFUJ_12278 FFUJ_12278 FFUJ_09719 FFUJ_09719 FFUJ_12583 FFUJ_12583 FFUJ_08698 FFUJ_08698 FFUJ_08658 FFUJ_08658 FFUJ_08285 FFUJ_08285 FFUJ_09831 FFUJ_09831 FFUJ_09577 FFUJ_09577 FFUJ_12235 FFUJ_12235 FFUJ_11696 FFUJ_11696 FFUJ_14201 FFUJ_14201
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_01851annotation not available (624 aa)
FFUJ_01347YTH domain-containing protein. (637 aa)
FFUJ_01314Related to DNA-directed RNA polymerase II chain. (158 aa)
FFUJ_01031Related to YTH1 Protein of the 3` processing complex. (481 aa)
FFUJ_00839Related to RNA-binding protein. (858 aa)
FFUJ_01671Related to nucleolar phosphoprotein. (663 aa)
FFUJ_01279Related to RRP46 protein, involved in rRNA processing. (250 aa)
FFUJ_01854Related to MUC1 Extracellular alpha-1,4-glucan glucosidase. (1590 aa)
FFUJ_01932Related to mei2 protein. (408 aa)
FFUJ_00391Probable translation initiation factor eIF-4E; Belongs to the eukaryotic initiation factor 4E family. (256 aa)
FFUJ_04538Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (177 aa)
FFUJ_04690Related to histidine triad protein member. (328 aa)
FFUJ_04307AAA_12 domain-containing protein. (298 aa)
FFUJ_04176Probable MOT2-transcriptional repressor. (1548 aa)
FFUJ_04278Uncharacterized protein. (160 aa)
FFUJ_04159Uncharacterized protein. (531 aa)
FFUJ_03829Uncharacterized protein. (398 aa)
FFUJ_03828Uncharacterized protein. (372 aa)
FFUJ_03827Uncharacterized protein. (374 aa)
FFUJ_04843Related to topoisomerase II-associated protein. (816 aa)
FFUJ_01413Probable DNA-directed RNA polymerase II chain Rpb7. (172 aa)
FFUJ_04249EST1_DNA_bind domain-containing protein. (732 aa)
FFUJ_02618Related to cap binding protein 80 (Cbp80). (797 aa)
FFUJ_04008Related to 3`-5` exoribonuclease required for 3` end formation of 5.8S rRNA. (268 aa)
FFUJ_02905Probable RNA binding protein. (1160 aa)
FFUJ_03836Uncharacterized protein. (525 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (123 aa)
FFUJ_03273Related to RNA-binding protein pumilio. (756 aa)
FFUJ_04334Related to translation elongation factor HBS1 protein. (794 aa)
FFUJ_030715'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1414 aa)
FFUJ_03835Uncharacterized protein. (588 aa)
FFUJ_13241Related to nucleolar 100K polymyositis-scleroderma protein. (811 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
FFUJ_13469Related to Ribonuclease III. (344 aa)
FFUJ_13635Related to Gbp2p. (490 aa)
FFUJ_02621Probable CSL4-core component of the 3`-5` exosome. (208 aa)
FFUJ_14777Uncharacterized protein. (477 aa)
FFUJ_13559Related to SKI3-antiviral protein. (1421 aa)
FFUJ_07298Uncharacterized protein. (631 aa)
FFUJ_07502Related to 3`->5` exoribonuclease. (333 aa)
FFUJ_07533Probable HUPF1 protein. (1083 aa)
FFUJ_07706Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (401 aa)
FFUJ_13227Related to GTP-binding protein beta subunit-like protein. (408 aa)
FFUJ_13255SAM domain-containing protein. (173 aa)
FFUJ_07890Uncharacterized protein. (270 aa)
FFUJ_07095Related to NOT3-general negative regulator of transcription, subunit 3. (609 aa)
FFUJ_13467Related to RNA-binding protein pumilio. (769 aa)
FFUJ_05641Related to snRNP protein. (133 aa)
FFUJ_05597Probable SKI2-antiviral protein and putative helicase. (1275 aa)
FFUJ_05717Related to small unique nuclear receptor co-repressor. (185 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (672 aa)
FFUJ_05919Related to exosome complex exonuclease. (333 aa)
FFUJ_06165Uncharacterized protein. (798 aa)
FFUJ_06170Uncharacterized protein. (1522 aa)
FFUJ_06037Related to CDC39 protein. (2170 aa)
FFUJ_06234C3H1-type domain-containing protein. (1123 aa)
FFUJ_06167annotation not available (245 aa)
FFUJ_06151Related to ribonuclease P chain POP1. (904 aa)
FFUJ_07458CCHC-type domain-containing protein. (282 aa)
FFUJ_05612DUF2439 domain-containing protein. (1054 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1087 aa)
FFUJ_07457Uncharacterized protein. (208 aa)
FFUJ_08655Related to cullin homolog 4A; Belongs to the cullin family. (795 aa)
FFUJ_08644Probable rRNA processing protein. (293 aa)
FFUJ_08623Nuclear cap-binding protein subunit 2. (173 aa)
FFUJ_08513Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (635 aa)
FFUJ_07942Related to mei2 protein. (607 aa)
FFUJ_08593Uncharacterized protein. (239 aa)
FFUJ_08321Related to rRNA processing protein. (339 aa)
FFUJ_05420Uncharacterized protein. (436 aa)
FFUJ_12211Uncharacterized protein. (405 aa)
FFUJ_13833Uncharacterized protein. (219 aa)
FFUJ_05892Probable SUP35-eukaryotic peptide chain release factor GTP-binding subunit. (704 aa)
FFUJ_08546Related to PUB1-major polyadenylated RNA-binding protein of nucleus and cytoplasm. (474 aa)
FFUJ_13777Related to CCR4 protein. (698 aa)
FFUJ_08535Related to decapping enzyme. (833 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (169 aa)
FFUJ_12278Related to regulator of nonsense transcripts. (1136 aa)
FFUJ_09719Related to caffeine-induced death protein 1 Cid1. (1055 aa)
FFUJ_12583C2H2-type domain-containing protein. (695 aa)
FFUJ_08698Related to POP2-required for glucose derepression. (484 aa)
FFUJ_08658Related to YjeF_N domain protein. (710 aa)
FFUJ_08285Uncharacterized protein. (249 aa)
FFUJ_09831Uncharacterized protein. (260 aa)
FFUJ_09577Probable RNA helicase dbp2 (DEAD box protein); Belongs to the DEAD box helicase family. (563 aa)
FFUJ_12235Related to poly(A) polymerase. (1496 aa)
FFUJ_11696AAA_12 domain-containing protein. (1177 aa)
FFUJ_14201Uncharacterized protein. (105 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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