STRINGSTRING
FFUJ_01202 FFUJ_01202 FFUJ_13395 FFUJ_13395 FFUJ_07987 FFUJ_07987 FFUJ_13036 FFUJ_13036 FFUJ_07233 FFUJ_07233 PAD1-2 PAD1-2 FFUJ_02960 FFUJ_02960 FFUJ_02938 FFUJ_02938 FFUJ_13635 FFUJ_13635 FFUJ_13591 FFUJ_13591 FFUJ_03205 FFUJ_03205 FFUJ_13521 FFUJ_13521 FFUJ_01764 FFUJ_01764 FFUJ_01602 FFUJ_01602 FFUJ_01508 FFUJ_01508 FFUJ_01130 FFUJ_01130 FFUJ_01347 FFUJ_01347 FFUJ_01177 FFUJ_01177 FFUJ_00881 FFUJ_00881 FFUJ_01940 FFUJ_01940 FFUJ_00399 FFUJ_00399 FFUJ_01671 FFUJ_01671 FFUJ_01389 FFUJ_01389 FFUJ_07495 FFUJ_07495 FFUJ_14271 FFUJ_14271 FFUJ_13467 FFUJ_13467 FFUJ_07161 FFUJ_07161 FFUJ_05789 FFUJ_05789 FFUJ_05564 FFUJ_05564 FFUJ_05706 FFUJ_05706 PAD1-4 PAD1-4 FFUJ_07930 FFUJ_07930 FFUJ_06188 FFUJ_06188 FFUJ_05692 FFUJ_05692 FFUJ_05708 FFUJ_05708 FFUJ_06053 FFUJ_06053 FFUJ_07640 FFUJ_07640 FFUJ_08552 FFUJ_08552 FFUJ_07902 FFUJ_07902 FFUJ_08499 FFUJ_08499 FFUJ_08614 FFUJ_08614 FFUJ_08352 FFUJ_08352 FFUJ_08373 FFUJ_08373 FFUJ_08553 FFUJ_08553 FFUJ_08548 FFUJ_08548 FFUJ_08247 FFUJ_08247 FFUJ_13908 FFUJ_13908 FFUJ_13817 FFUJ_13817 FFUJ_05709 FFUJ_05709 FFUJ_12211 FFUJ_12211 FFUJ_12294 FFUJ_12294 FFUJ_13833 FFUJ_13833 FFUJ_08575 FFUJ_08575 FFUJ_08546 FFUJ_08546 FFUJ_12349 FFUJ_12349 FFUJ_06095 FFUJ_06095 FFUJ_08271 FFUJ_08271 FFUJ_08835 FFUJ_08835 FFUJ_08794 FFUJ_08794 FFUJ_08658 FFUJ_08658 CLU1 CLU1 FFUJ_13841 FFUJ_13841 FFUJ_09856 FFUJ_09856 FFUJ_11553 FFUJ_11553 FFUJ_10044 FFUJ_10044 FFUJ_11557 FFUJ_11557 FFUJ_10954 FFUJ_10954 FFUJ_09570 FFUJ_09570 FFUJ_09814 FFUJ_09814 FFUJ_00856 FFUJ_00856 FFUJ_00867 FFUJ_00867 FFUJ_00509 FFUJ_00509 FFUJ_01317 FFUJ_01317 FFUJ_01268 FFUJ_01268 FFUJ_00772 FFUJ_00772 FFUJ_00771 FFUJ_00771 FFUJ_04966 FFUJ_04966 FFUJ_04128 FFUJ_04128 FFUJ_05205 FFUJ_05205 FFUJ_03079 FFUJ_03079 FFUJ_13416 FFUJ_13416 FFUJ_13213 FFUJ_13213 FFUJ_13277 FFUJ_13277 FFUJ_02804 FFUJ_02804 FFUJ_01080 FFUJ_01080 FFUJ_02392 FFUJ_02392 FFUJ_04357 FFUJ_04357 FFUJ_02618 FFUJ_02618 FFUJ_03851 FFUJ_03851 FFUJ_02870 FFUJ_02870 FFUJ_14897 FFUJ_14897 PAD1 PAD1 FFUJ_03278 FFUJ_03278 FFUJ_03273 FFUJ_03273 FFUJ_03214 FFUJ_03214 FFUJ_03236 FFUJ_03236 FFUJ_03107 FFUJ_03107 FFUJ_03106 FFUJ_03106 FFUJ_04751 FFUJ_04751 FFUJ_02905 FFUJ_02905 FFUJ_03017 FFUJ_03017 FFUJ_02802 FFUJ_02802 FFUJ_02706 FFUJ_02706 FFUJ_01851 FFUJ_01851 FFUJ_07315 FFUJ_07315 FFUJ_13255 FFUJ_13255 PAD1-3 PAD1-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_01202Probable ribosomal protein L35. (124 aa)
FFUJ_13395Probable RNA splicing factor Pad-1. (566 aa)
FFUJ_07987Related to hexamer-binding protein HEXBP. (223 aa)
FFUJ_13036PWI domain-containing protein. (735 aa)
FFUJ_07233Probable heterogeneous nuclear ribonucleoprotein HRP1. (512 aa)
PAD1-2Flavin prenyltransferase PAD1, mitochondrial; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for the ferulic acid decarboxylase FDC1. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (239 aa)
FFUJ_02960Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (264 aa)
FFUJ_02938Probable eukaryotic release factor 1. (435 aa)
FFUJ_13635Related to Gbp2p. (490 aa)
FFUJ_13591Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (674 aa)
FFUJ_03205Related to 60S ribosomal protein L12, mitochondrial. (181 aa)
FFUJ_13521Related to glucan 1,4-alpha-glucosidase. (463 aa)
FFUJ_01764Probable ribosomal RNA-processing protein 12. (1240 aa)
FFUJ_01602Probable CDC40-cell division control protein. (529 aa)
FFUJ_01508Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (576 aa)
FFUJ_01130Probable polysaccharide export protein (CAP59). (406 aa)
FFUJ_01347YTH domain-containing protein. (637 aa)
FFUJ_01177Probable cutinase negative acting protein. (506 aa)
FFUJ_00881Related to cleavage stimulation factor 64K chain. (293 aa)
FFUJ_01940Uncharacterized protein. (274 aa)
FFUJ_00399Related to excision repair protein RAD4. (781 aa)
FFUJ_01671Related to nucleolar phosphoprotein. (663 aa)
FFUJ_01389Related to RNA binding protein Pym. (192 aa)
FFUJ_07495Probable translation initiation factor eIF-2 beta chain. (336 aa)
FFUJ_14271Uncharacterized protein. (560 aa)
FFUJ_13467Related to RNA-binding protein pumilio. (769 aa)
FFUJ_07161Related to hexamer-binding protein HEXBP. (178 aa)
FFUJ_05789Related to WHI3 protein, involved in regulation of cell size. (546 aa)
FFUJ_05564Related to UNR-interacting protein STRAP (Serine-threonine kinase receptor-associated protein). (352 aa)
FFUJ_05706Related to heterogeneous nuclear ribonucleoprotein HRP1. (371 aa)
PAD1-4Flavin prenyltransferase PAD1, mitochondrial; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for the ferulic acid decarboxylase FDC1. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (196 aa)
FFUJ_07930Probable 40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
FFUJ_06188Probable ribosomal protein L24.e.A, cytosolic. (160 aa)
FFUJ_05692Uncharacterized protein. (961 aa)
FFUJ_05708RRM domain-containing protein. (258 aa)
FFUJ_06053S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. (307 aa)
FFUJ_07640Related to ribosomal protein YmS18, mitochondrial. (237 aa)
FFUJ_08552Related to translation initiation factor eIF-4F. (1504 aa)
FFUJ_07902Related to nucleolar protein NOP4 (NOP77). (737 aa)
FFUJ_08499Protein VTS1. (616 aa)
FFUJ_08614Uncharacterized protein. (312 aa)
FFUJ_08352Related to SCD6-suppressor of clathrin deficiency. (541 aa)
FFUJ_08373Related to RNA annealing protein. (261 aa)
FFUJ_08553Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1439 aa)
FFUJ_08548Uncharacterized protein. (319 aa)
FFUJ_0824740S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (117 aa)
FFUJ_13908Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (368 aa)
FFUJ_13817Related to branch point bridging protein (MSL5). (553 aa)
FFUJ_05709Uncharacterized protein. (101 aa)
FFUJ_12211Uncharacterized protein. (405 aa)
FFUJ_12294Related to URB1 Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNAs. (1130 aa)
FFUJ_13833Uncharacterized protein. (219 aa)
FFUJ_08575Related to RNA binding protein Nrd1. (786 aa)
FFUJ_08546Related to PUB1-major polyadenylated RNA-binding protein of nucleus and cytoplasm. (474 aa)
FFUJ_12349Probable U1 snRNP protein. (267 aa)
FFUJ_06095Related to ribosomal protein S7. (351 aa)
FFUJ_08271Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (390 aa)
FFUJ_08835Related to NADPH2:quinone reductase. (329 aa)
FFUJ_08794Related to regulatory protein RLR1. (2425 aa)
FFUJ_08658Related to YjeF_N domain protein. (710 aa)
CLU1Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria. (1262 aa)
FFUJ_13841Probable ribosomal protein l13a; Belongs to the universal ribosomal protein uL13 family. (202 aa)
FFUJ_09856Related to PCF11 component of pre-mRNA 3`-end processing factor CF I. (602 aa)
FFUJ_11553Related to large-conductance mechanosensitive channel. (1090 aa)
FFUJ_10044Uncharacterized protein. (4489 aa)
FFUJ_11557Uncharacterized protein. (365 aa)
FFUJ_10954Uncharacterized protein. (555 aa)
FFUJ_09570Probable ribosomal protein L23, mitochondrial. (179 aa)
FFUJ_09814Related to P element somatic inhibitor. (564 aa)
FFUJ_00856Related to RNA14-component of pre-mRNA 3`-end processing factor CF I. (981 aa)
FFUJ_00867Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (123 aa)
FFUJ_00509Related to Het-c protein. (919 aa)
FFUJ_01317Related to PUF6 Member of the PUF protein family. (683 aa)
FFUJ_01268Related to conserved coiled/coiled coil protein. (217 aa)
FFUJ_00772Related to Drosophila pumilio protein and Mpt5p protein. (867 aa)
FFUJ_00771Uncharacterized protein. (272 aa)
FFUJ_04966Related to KH domain protein. (932 aa)
FFUJ_04128Questionable protein. (310 aa)
FFUJ_05205Related to polyadenylate-binding protein. (407 aa)
FFUJ_03079Related to 60S ribosomal subunit assembly/export protein LOC1. (195 aa)
FFUJ_13416Uncharacterized protein. (480 aa)
FFUJ_13213Probable 40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (213 aa)
FFUJ_13277Uncharacterized protein. (649 aa)
FFUJ_02804U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (554 aa)
FFUJ_01080Proteasome subunit alpha type. (293 aa)
FFUJ_02392Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1047 aa)
FFUJ_04357Related to SCP160 protein. (1272 aa)
FFUJ_02618Related to cap binding protein 80 (Cbp80). (797 aa)
FFUJ_03851Related to RNA-binding protein Y14. (153 aa)
FFUJ_02870annotation not available (294 aa)
FFUJ_14897Related to Ras-GTPase-activating protein binding protein 2. (523 aa)
PAD1Flavin prenyltransferase PAD1, mitochondrial; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for the ferulic acid decarboxylase FDC1. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (271 aa)
FFUJ_03278Related to U1 small nuclear ribonucleoprotein. (392 aa)
FFUJ_03273Related to RNA-binding protein pumilio. (756 aa)
FFUJ_03214DUF2040 domain-containing protein. (400 aa)
FFUJ_03236Related to CBP3-required for assembly of cytochrome bc1 complex. (307 aa)
FFUJ_03107Uncharacterized protein. (147 aa)
FFUJ_03106TPR_REGION domain-containing protein. (193 aa)
FFUJ_04751Related to brefeldin A resistance protein BFR1 (Maintenance of normal ploidy). (474 aa)
FFUJ_02905Probable RNA binding protein. (1160 aa)
FFUJ_03017Related to RNA and export factor binding protein. (348 aa)
FFUJ_02802Probable nuclear protein. (1210 aa)
FFUJ_02706Related to DNA-directed RNA polymerase III, 47 KD subunit. (545 aa)
FFUJ_01851annotation not available (624 aa)
FFUJ_07315U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (199 aa)
FFUJ_13255SAM domain-containing protein. (173 aa)
PAD1-3Flavin prenyltransferase PAD1, mitochondrial; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for the ferulic acid decarboxylase FDC1. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (245 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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