13 items (Fusarium fujikuroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FFUJ_01314	Related to DNA-directed RNA polymerase II chain. (158 aa)
	FFUJ_01657	Probable DNA-directed RNA polymerase II chain RPB3. (340 aa)
	FFUJ_00711	Probable DNA-directed RNA polymerase II chain RPB10. (80 aa)
	FFUJ_00929	Uncharacterized protein. (458 aa)
	FFUJ_00736	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1750 aa)
	FFUJ_04750	Probable DNA-directed RNA polymerase chain RPB5. (236 aa)
	FFUJ_01413	Probable DNA-directed RNA polymerase II chain Rpb7. (172 aa)
	FFUJ_03301	Probable DNA-directed RNA polymerase I, II, III 18kD subunit. (154 aa)
	FFUJ_03478	Related to DNA-directed RNA polymerase II chain RPB9. (186 aa)
	FFUJ_03053	Related to DNA-directed RNA polymerase 13.3K chain. (136 aa)
	FFUJ_07996	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1270 aa)
	FFUJ_09731	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
	FFUJ_09462	Related to DNA-directed RNA polymerase small Zn-binding chain. (72 aa)

Your Current Organism:

Fusarium fujikuroi

NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FFUJ_00711	FFUJ_00736	S0DJI7	S0DMU0	Probable DNA-directed RNA polymerase II chain RPB10.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.995
FFUJ_00711	FFUJ_00929	S0DJI7	S0DJN2	Probable DNA-directed RNA polymerase II chain RPB10.	Uncharacterized protein.	0.982
FFUJ_00711	FFUJ_01314	S0DJI7	S0DIX7	Probable DNA-directed RNA polymerase II chain RPB10.	Related to DNA-directed RNA polymerase II chain.	0.997
FFUJ_00711	FFUJ_01413	S0DJI7	S0DS62	Probable DNA-directed RNA polymerase II chain RPB10.	Probable DNA-directed RNA polymerase II chain Rpb7.	0.997
FFUJ_00711	FFUJ_01657	S0DJI7	S0DIC5	Probable DNA-directed RNA polymerase II chain RPB10.	Probable DNA-directed RNA polymerase II chain RPB3.	0.999
FFUJ_00711	FFUJ_03053	S0DJI7	S0E024	Probable DNA-directed RNA polymerase II chain RPB10.	Related to DNA-directed RNA polymerase 13.3K chain.	0.998
FFUJ_00711	FFUJ_03301	S0DJI7	S0DY09	Probable DNA-directed RNA polymerase II chain RPB10.	Probable DNA-directed RNA polymerase I, II, III 18kD subunit.	0.999
FFUJ_00711	FFUJ_03478	S0DJI7	S0DYF9	Probable DNA-directed RNA polymerase II chain RPB10.	Related to DNA-directed RNA polymerase II chain RPB9.	0.997
FFUJ_00711	FFUJ_04750	S0DJI7	S0DNB9	Probable DNA-directed RNA polymerase II chain RPB10.	Probable DNA-directed RNA polymerase chain RPB5.	0.999
FFUJ_00711	FFUJ_07996	S0DJI7	S0E326	Probable DNA-directed RNA polymerase II chain RPB10.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
FFUJ_00711	FFUJ_09462	S0DJI7	S0EGE4	Probable DNA-directed RNA polymerase II chain RPB10.	Related to DNA-directed RNA polymerase small Zn-binding chain.	0.999
FFUJ_00711	FFUJ_09731	S0DJI7	S0EFK5	Probable DNA-directed RNA polymerase II chain RPB10.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.998
FFUJ_00736	FFUJ_00711	S0DMU0	S0DJI7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Probable DNA-directed RNA polymerase II chain RPB10.	0.995
FFUJ_00736	FFUJ_01314	S0DMU0	S0DIX7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Related to DNA-directed RNA polymerase II chain.	0.995
FFUJ_00736	FFUJ_01413	S0DMU0	S0DS62	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Probable DNA-directed RNA polymerase II chain Rpb7.	0.997
FFUJ_00736	FFUJ_01657	S0DMU0	S0DIC5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Probable DNA-directed RNA polymerase II chain RPB3.	0.997
FFUJ_00736	FFUJ_03053	S0DMU0	S0E024	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Related to DNA-directed RNA polymerase 13.3K chain.	0.997
FFUJ_00736	FFUJ_03301	S0DMU0	S0DY09	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Probable DNA-directed RNA polymerase I, II, III 18kD subunit.	0.997
FFUJ_00736	FFUJ_03478	S0DMU0	S0DYF9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Related to DNA-directed RNA polymerase II chain RPB9.	0.995
FFUJ_00736	FFUJ_04750	S0DMU0	S0DNB9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Probable DNA-directed RNA polymerase chain RPB5.	0.997