STRINGSTRING
FFUJ_09960 FFUJ_09960 FFUJ_01951 FFUJ_01951 FFUJ_01879 FFUJ_01879 FFUJ_01806 FFUJ_01806 FFUJ_01528 FFUJ_01528 FFUJ_01714 FFUJ_01714 FFUJ_01555 FFUJ_01555 FFUJ_01591 FFUJ_01591 FFUJ_01531 FFUJ_01531 FFUJ_01081 FFUJ_01081 FFUJ_01059 FFUJ_01059 FFUJ_01293 FFUJ_01293 FFUJ_01177 FFUJ_01177 FFUJ_00875 FFUJ_00875 FFUJ_00869 FFUJ_00869 FFUJ_00733 FFUJ_00733 FFUJ_00711 FFUJ_00711 FFUJ_00640 FFUJ_00640 FFUJ_00844 FFUJ_00844 FFUJ_00779 FFUJ_00779 FFUJ_00703 FFUJ_00703 FFUJ_00399 FFUJ_00399 NOP7 NOP7 FFUJ_01671 FFUJ_01671 FFUJ_01656 FFUJ_01656 FFUJ_00371 FFUJ_00371 FFUJ_01484 FFUJ_01484 FFUJ_01279 FFUJ_01279 FFUJ_01325 FFUJ_01325 FFUJ_00690 FFUJ_00690 FFUJ_00916 FFUJ_00916 NAT10 NAT10 FFUJ_01004 FFUJ_01004 FFUJ_00953 FFUJ_00953 FFUJ_05194 FFUJ_05194 FFUJ_00883 FFUJ_00883 FFUJ_04992 FFUJ_04992 FFUJ_04914 FFUJ_04914 FFUJ_05040 FFUJ_05040 FFUJ_04841 FFUJ_04841 FFUJ_01542 FFUJ_01542 FFUJ_04750 FFUJ_04750 FFUJ_04735 FFUJ_04735 FFUJ_01377 FFUJ_01377 FFUJ_01317 FFUJ_01317 FFUJ_01289 FFUJ_01289 FFUJ_04578 FFUJ_04578 FFUJ_04763 FFUJ_04763 FFUJ_04758 FFUJ_04758 FFUJ_01217 FFUJ_01217 FFUJ_04538 FFUJ_04538 FFUJ_04729 FFUJ_04729 FFUJ_04711 FFUJ_04711 FFUJ_04706 FFUJ_04706 FFUJ_04624 FFUJ_04624 FFUJ_01103 FFUJ_01103 FFUJ_01367 FFUJ_01367 FFUJ_04278 FFUJ_04278 FFUJ_04159 FFUJ_04159 FFUJ_00712 FFUJ_00712 FFUJ_04081 FFUJ_04081 FFUJ_04983 FFUJ_04983 FFUJ_03838 FFUJ_03838 FFUJ_03719 FFUJ_03719 FFUJ_05301 FFUJ_05301 FFUJ_04944 FFUJ_04944 FFUJ_02235 FFUJ_02235 FFUJ_02358 FFUJ_02358 FFUJ_02519 FFUJ_02519 FFUJ_02423 FFUJ_02423 FFUJ_02469 FFUJ_02469 FFUJ_02638 FFUJ_02638 FFUJ_05132 FFUJ_05132 FFUJ_02478 FFUJ_02478 FFUJ_02520 FFUJ_02520 FFUJ_02567 FFUJ_02567 FFUJ_02756 FFUJ_02756 FFUJ_02645 FFUJ_02645 FFUJ_04987 FFUJ_04987 FFUJ_02764 FFUJ_02764 FFUJ_02774 FFUJ_02774 FFUJ_04008 FFUJ_04008 FFUJ_02874 FFUJ_02874 FFUJ_02899 FFUJ_02899 FFUJ_02927 FFUJ_02927 FFUJ_02999 FFUJ_02999 FFUJ_03200 FFUJ_03200 YTM1 YTM1 FFUJ_03077 FFUJ_03077 FFUJ_03082 FFUJ_03082 FFUJ_03277 FFUJ_03277 FFUJ_03160 FFUJ_03160 FFUJ_03204 FFUJ_03204 LSM4 LSM4 FFUJ_03362 FFUJ_03362 SPB1 SPB1 FFUJ_02465 FFUJ_02465 FFUJ_03246 FFUJ_03246 FFUJ_03260 FFUJ_03260 FFUJ_02796 FFUJ_02796 FFUJ_02585 FFUJ_02585 FFUJ_02815 FFUJ_02815 FFUJ_02886 FFUJ_02886 FFUJ_09497 FFUJ_09497 FFUJ_13264 FFUJ_13264 FFUJ_13296 FFUJ_13296 FFUJ_13241 FFUJ_13241 FFUJ_13368 FFUJ_13368 FFUJ_13322 FFUJ_13322 LSM5 LSM5 FFUJ_03068 FFUJ_03068 FFUJ_03079 FFUJ_03079 FFUJ_13431 FFUJ_13431 FFUJ_13469 FFUJ_13469 FFUJ_13583 FFUJ_13583 FFUJ_13610 FFUJ_13610 FFUJ_03301 FFUJ_03301 FFUJ_13577 FFUJ_13577 FFUJ_13669 FFUJ_13669 FFUJ_03478 FFUJ_03478 FFUJ_02564 FFUJ_02564 FFUJ_02621 FFUJ_02621 FFUJ_02739 FFUJ_02739 FFUJ_02805 FFUJ_02805 FFUJ_14870 FFUJ_14870 FFUJ_03095 FFUJ_03095 FFUJ_06982 FFUJ_06982 FFUJ_03148 FFUJ_03148 FFUJ_07178 FFUJ_07178 FFUJ_07215 FFUJ_07215 FFUJ_03287 FFUJ_03287 FFUJ_13454 FFUJ_13454 FFUJ_13477 FFUJ_13477 FFUJ_07143 FFUJ_07143 FFUJ_13638 FFUJ_13638 FFUJ_07221 FFUJ_07221 FFUJ_07502 FFUJ_07502 FFUJ_07460 FFUJ_07460 FFUJ_14570 FFUJ_14570 FFUJ_07477 FFUJ_07477 FFUJ_14647 FFUJ_14647 ERB1 ERB1 FFUJ_07703 FFUJ_07703 FFUJ_07709 FFUJ_07709 FFUJ_07938 FFUJ_07938 FFUJ_13020 FFUJ_13020 FFUJ_13061 FFUJ_13061 FFUJ_07970 FFUJ_07970 FFUJ_13159 FFUJ_13159 FFUJ_13180 FFUJ_13180 FFUJ_13352 FFUJ_13352 FFUJ_07851 FFUJ_07851 FFUJ_13376 FFUJ_13376 FFUJ_07534 FFUJ_07534 FFUJ_07161 FFUJ_07161 FFUJ_13649 FFUJ_13649 FFUJ_05592 FFUJ_05592 FFUJ_05717 FFUJ_05717 FFUJ_14731 FFUJ_14731 FFUJ_05919 FFUJ_05919 FFUJ_07649 FFUJ_07649 LSM3 LSM3 FFUJ_06130 FFUJ_06130 FFUJ_06175 FFUJ_06175 FFUJ_06132 FFUJ_06132 FFUJ_06167 FFUJ_06167 FFUJ_06151 FFUJ_06151 FFUJ_06498 FFUJ_06498 FFUJ_06325 FFUJ_06325 FFUJ_09860 FFUJ_09860 FFUJ_05495 FFUJ_05495 FFUJ_05728 FFUJ_05728 FFUJ_07295 FFUJ_07295 FFUJ_07414 FFUJ_07414 FFUJ_08832 FFUJ_08832 FFUJ_07614 FFUJ_07614 FFUJ_06072 FFUJ_06072 FFUJ_08717 FFUJ_08717 FFUJ_08685 FFUJ_08685 FFUJ_08644 FFUJ_08644 FFUJ_08636 FFUJ_08636 FFUJ_08872 FFUJ_08872 FFUJ_08538 FFUJ_08538 FFUJ_08672 FFUJ_08672 FFUJ_08593 FFUJ_08593 TIF6 TIF6 FFUJ_08548 FFUJ_08548 FFUJ_07806 FFUJ_07806 FFUJ_07886 FFUJ_07886 FFUJ_07393 FFUJ_07393 FEN1 FEN1 FFUJ_09100 FFUJ_09100 FFUJ_08377 FFUJ_08377 FFUJ_08682 FFUJ_08682 FFUJ_08321 FFUJ_08321 FFUJ_05888 FFUJ_05888 FFUJ_05948 FFUJ_05948 FFUJ_14915 FFUJ_14915 FFUJ_08831 FFUJ_08831 FFUJ_12186 FFUJ_12186 FFUJ_08763 FFUJ_08763 FFUJ_12260 FFUJ_12260 FFUJ_12271 FFUJ_12271 FFUJ_08596 FFUJ_08596 FFUJ_12294 FFUJ_12294 FFUJ_05869 FFUJ_05869 FFUJ_08318 FFUJ_08318 FFUJ_08291 FFUJ_08291 FFUJ_12392 FFUJ_12392 FFUJ_12692 FFUJ_12692 FFUJ_06297 FFUJ_06297 FFUJ_12897 FFUJ_12897 FFUJ_09873 FFUJ_09873 FFUJ_09957 FFUJ_09957 FFUJ_09788 FFUJ_09788 FFUJ_09099 FFUJ_09099 FFUJ_09735 FFUJ_09735 FFUJ_09599 FFUJ_09599 FFUJ_08948 FFUJ_08948 FFUJ_09750 FFUJ_09750 FFUJ_09789 FFUJ_09789 FFUJ_09731 FFUJ_09731 FFUJ_08691 FFUJ_08691 FFUJ_09631 FFUJ_09631 FFUJ_09626 FFUJ_09626 FFUJ_08595 FFUJ_08595 FFUJ_09886 FFUJ_09886 FFUJ_09462 FFUJ_09462 FFUJ_09452 FFUJ_09452 FFUJ_09815 FFUJ_09815 FFUJ_09893 FFUJ_09893 FFUJ_08302 FFUJ_08302 FFUJ_09883 FFUJ_09883 FFUJ_09872 FFUJ_09872 FFUJ_08249 FFUJ_08249 FFUJ_09787 FFUJ_09787 FFUJ_10513 FFUJ_10513 FFUJ_12282 FFUJ_12282 FFUJ_12589 FFUJ_12589 FFUJ_11452 FFUJ_11452 FFUJ_10033 FFUJ_10033
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_09960Related to SRP40-suppressor of mutant AC40 of RNA polymerase I and III. (1504 aa)
FFUJ_01951Related to flavonol synthase-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (345 aa)
FFUJ_01879Probable ATP dependent RNA helicase. (1039 aa)
FFUJ_01806Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (740 aa)
FFUJ_01528Related to MAK21-protein required for 60S ribosomal subunit biogenesis. (981 aa)
FFUJ_01714Related to ribonuclease P protein subunit p30. (297 aa)
FFUJ_01555Related to ATP-dependent RNA helicase. (777 aa)
FFUJ_01591Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (618 aa)
FFUJ_01531Uncharacterized protein. (478 aa)
FFUJ_01081Probable DNA polymerase V. (990 aa)
FFUJ_01059Related to CDC14-dual specificity phosphatase. (658 aa)
FFUJ_01293Related to component of the ribosomal RNA processing machinery. (361 aa)
FFUJ_01177Probable cutinase negative acting protein. (506 aa)
FFUJ_00875Probable DNA-directed RNA polymerase. (381 aa)
FFUJ_00869U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (120 aa)
FFUJ_00733Uncharacterized protein. (222 aa)
FFUJ_00711Probable DNA-directed RNA polymerase II chain RPB10. (80 aa)
FFUJ_00640Related to ATP dependent RNA helicase. (898 aa)
FFUJ_00844Probable Polynucleotide 5'-hydroxyl-kinase GRC3. (745 aa)
FFUJ_00779Related to centromere associated protein. (663 aa)
FFUJ_00703Related to MRD1. (857 aa)
FFUJ_00399Related to excision repair protein RAD4. (781 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (661 aa)
FFUJ_01671Related to nucleolar phosphoprotein. (663 aa)
FFUJ_01656Probable SOF1 protein. (445 aa)
FFUJ_00371Related to UTP4-U3 snoRNP protein. (879 aa)
FFUJ_01484Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (255 aa)
FFUJ_01279Related to RRP46 protein, involved in rRNA processing. (250 aa)
FFUJ_01325Probable NSA2-involved in biogenesis of ribosomal large subunit. (260 aa)
FFUJ_00690Related to ATP-dependent RNA helicase ROK1. (693 aa)
FFUJ_00916Related to nuM1, hnRNP protein. (549 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1066 aa)
FFUJ_01004Related to UTP18 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA. (581 aa)
FFUJ_00953Related to rRNA-processing protein UTP23. (287 aa)
FFUJ_05194Related to N-methyltransferases. (280 aa)
FFUJ_00883annotation not available (549 aa)
FFUJ_04992Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (627 aa)
FFUJ_04914Related to bystin. (485 aa)
FFUJ_05040Related to U3 snoRNP protein. (1042 aa)
FFUJ_04841Related to LCP5-U3 small nucleolar ribonucleoprotein involved in maturation of 18S rRNA. (362 aa)
FFUJ_01542Pre-rRNA-processing protein PNO1. (257 aa)
FFUJ_04750Probable DNA-directed RNA polymerase chain RPB5. (236 aa)
FFUJ_04735ATP-dependent RNA helicase DBP10. (897 aa)
FFUJ_01377Related to nuclear GTPase. (544 aa)
FFUJ_01317Related to PUF6 Member of the PUF protein family. (683 aa)
FFUJ_01289Related to RNA 3`-terminal phosphate cyclase-like protein. (387 aa)
FFUJ_04578Related to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (749 aa)
FFUJ_04763Probable Pre-rRNA-processing protein ESF2. (324 aa)
FFUJ_04758Related to ATP dependent RNA helicase; Belongs to the DEAD box helicase family. (742 aa)
FFUJ_01217DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1158 aa)
FFUJ_04538Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (177 aa)
FFUJ_04729DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (122 aa)
FFUJ_04711Uncharacterized protein. (545 aa)
FFUJ_04706Related to GTP-binding protein Bms1p, required for distinct steps of 40S ribosome biogenesis. (1132 aa)
FFUJ_04624Related to SRP40-suppressor of mutant AC40 of RNA polymerase I and III. (439 aa)
FFUJ_01103Related to papaya ringspot virus polyprotein. (2642 aa)
FFUJ_01367Probable RNA binding protein Rpf2 involved in ribosome biogenesis. (317 aa)
FFUJ_04278Uncharacterized protein. (160 aa)
FFUJ_04159Uncharacterized protein. (531 aa)
FFUJ_00712Related to small nucleolar ribonucleoprotein. (962 aa)
FFUJ_04081Uncharacterized protein. (270 aa)
FFUJ_04983Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
FFUJ_03838U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (268 aa)
FFUJ_03719Uncharacterized protein. (147 aa)
FFUJ_05301Probable UAF30-subunit of RNA polymerase I transcription factor. (262 aa)
FFUJ_04944KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (320 aa)
FFUJ_02235Uncharacterized protein. (305 aa)
FFUJ_02358Uncharacterized protein. (373 aa)
FFUJ_02519FCP1 homology domain-containing protein. (301 aa)
FFUJ_02423Related to WD repeat-containing protein jip5. (432 aa)
FFUJ_02469Uncharacterized protein. (299 aa)
FFUJ_02638Probable FCF1 involved in the pre-rRNA processing steps of 40S ribosomal subunit biogenesis. (198 aa)
FFUJ_05132Probable WD40-repeat protein (Notchless protein). (515 aa)
FFUJ_02478Uncharacterized protein. (212 aa)
FFUJ_02520Related to PITSLRE protein kinase isoforms. (317 aa)
FFUJ_02567Probable periodic tryptophan protein PWP2. (894 aa)
FFUJ_02756Related to TGS1 TrimethylGuanosine Synthase. (266 aa)
FFUJ_02645Probable centromere/microtubule binding protein cbf5. (487 aa)
FFUJ_04987Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (491 aa)
FFUJ_02764Related to RNA Polymerase I Transcription Factor Rrn3. (688 aa)
FFUJ_02774Related to cell growth regulating nucleolar protein LYAR. (472 aa)
FFUJ_04008Related to 3`-5` exoribonuclease required for 3` end formation of 5.8S rRNA. (268 aa)
FFUJ_02874Related to NOP14-nuclear and nucleolar protein with possible role in ribosome biogenesis. (901 aa)
FFUJ_0289960S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
FFUJ_02927Probable DNA-directed RNA polymerase I/III chain AC19. (162 aa)
FFUJ_02999DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (909 aa)
FFUJ_03200Related to UTP10-U3 snoRNP protein. (1807 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (475 aa)
FFUJ_03077Related to cell division cycle 2-related protein kinase 7. (994 aa)
FFUJ_03082Related to UTP13-U3 snoRNP protein. (908 aa)
FFUJ_03277Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (244 aa)
FFUJ_03160Related to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (539 aa)
FFUJ_03204Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4910 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (123 aa)
FFUJ_03362Probable ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (794 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (830 aa)
FFUJ_02465Related to rRNA processing protein EBP2. (410 aa)
FFUJ_03246Uncharacterized protein. (237 aa)
FFUJ_03260Related to 60S ribosomal protein L24. (220 aa)
FFUJ_02796Probable DIP2-Dom34p-interacting protein. (960 aa)
FFUJ_02585rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (119 aa)
FFUJ_02815Probable Nucleolar protein 9. (762 aa)
FFUJ_02886Related to rRNA-processing protein efg-1. (301 aa)
FFUJ_09497Uncharacterized protein. (279 aa)
FFUJ_13264Related to UTP6-U3 snoRNP protein. (395 aa)
FFUJ_13296Probable ECM16-putative DEAH-box RNA helicase. (1209 aa)
FFUJ_13241Related to nucleolar 100K polymyositis-scleroderma protein. (811 aa)
FFUJ_13368Uncharacterized protein. (284 aa)
FFUJ_13322Uncharacterized protein. (101 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
FFUJ_03068Related to a component of the yeast U3 snoRNP Rrp9p. (582 aa)
FFUJ_03079Related to 60S ribosomal subunit assembly/export protein LOC1. (195 aa)
FFUJ_13431Protein MAK16; Belongs to the MAK16 family. (319 aa)
FFUJ_13469Related to Ribonuclease III. (344 aa)
FFUJ_13583Related to RRP14-involved in ribosomal RNA processing. (559 aa)
FFUJ_13610H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (210 aa)
FFUJ_03301Probable DNA-directed RNA polymerase I, II, III 18kD subunit. (154 aa)
FFUJ_13577U3 small nucleolar RNA-associated protein 22. (1107 aa)
FFUJ_13669Rsa3 domain-containing protein. (115 aa)
FFUJ_03478Related to DNA-directed RNA polymerase II chain RPB9. (186 aa)
FFUJ_02564CutC domain-containing protein. (277 aa)
FFUJ_02621Probable CSL4-core component of the 3`-5` exosome. (208 aa)
FFUJ_02739Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (199 aa)
FFUJ_02805Probable ribosomal protein S13.e; Belongs to the universal ribosomal protein uS15 family. (151 aa)
FFUJ_14870Uncharacterized protein. (283 aa)
FFUJ_03095Related to NOL1R protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (606 aa)
FFUJ_06982Uncharacterized protein. (721 aa)
FFUJ_03148Uncharacterized protein. (297 aa)
FFUJ_07178Probable IMP3 (Component of the U3 small nucleolar ribonucleoprotein). (183 aa)
FFUJ_07215Uncharacterized protein. (395 aa)
FFUJ_03287Urb2 domain-containing protein. (1361 aa)
FFUJ_13454Checkpoint protein; Belongs to the HUS1 family. (342 aa)
FFUJ_13477Probable nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (679 aa)
FFUJ_07143Related to high mobility group-like protein NHP2. (241 aa)
FFUJ_13638Related to SGD1-involved in HOG pathway. (866 aa)
FFUJ_07221Related to RRP7 Protein involved in pre-rRNA processing and ribosome assembly. (313 aa)
FFUJ_07502Related to 3`->5` exoribonuclease. (333 aa)
FFUJ_07460Related to Pwp2p. (528 aa)
FFUJ_14570Related to formin binding protein. (284 aa)
FFUJ_07477U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (712 aa)
FFUJ_14647Uncharacterized protein. (357 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (766 aa)
FFUJ_07703Uncharacterized protein. (350 aa)
FFUJ_07709Probable RRB1-involved in the regulation of ribosome biosynthesis. (487 aa)
FFUJ_07938Related to FCF2 Essential nucleolar protein involved in the early steps of 35S rRNA processing. (201 aa)
FFUJ_13020Probable translation initiation factor eIF-4A; Belongs to the DEAD box helicase family. (402 aa)
FFUJ_13061Poly [ADP-ribose] polymerase. (747 aa)
FFUJ_07970Probable ATP dependent RNA helicase; Belongs to the DEAD box helicase family. (585 aa)
FFUJ_13159rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (342 aa)
FFUJ_13180Related to DUF1168 domain protein. (212 aa)
FFUJ_13352Related to NOP16 constituent of 66S pre-ribosomal particles. (215 aa)
FFUJ_07851Related to ribosomal RNA processing protein RRP5. (1791 aa)
FFUJ_13376Related to thioredoxin. (573 aa)
FFUJ_07534Probable IMP4 protein. (298 aa)
FFUJ_07161Related to hexamer-binding protein HEXBP. (178 aa)
FFUJ_13649Probable nucleolar essential protein 1. (259 aa)
FFUJ_05592Probable zuotin. (444 aa)
FFUJ_05717Related to small unique nuclear receptor co-repressor. (185 aa)
FFUJ_14731Uncharacterized protein. (778 aa)
FFUJ_05919Related to exosome complex exonuclease. (333 aa)
FFUJ_07649Probable ATP dependent RNA helicase. (614 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
FFUJ_06130Probable 3-methyl-2-oxobutanoate dehydrogenase (Lipoamide)E1 beta chain. (394 aa)
FFUJ_06175Uncharacterized protein. (192 aa)
FFUJ_06132Methyltransf_25 domain-containing protein. (215 aa)
FFUJ_06167annotation not available (245 aa)
FFUJ_06151Related to ribonuclease P chain POP1. (904 aa)
FFUJ_06498Related to DNA-directed DNA polymerase. (689 aa)
FFUJ_06325Uncharacterized protein. (267 aa)
FFUJ_09860Related to RNA binding protein. (373 aa)
FFUJ_05495Methyltransf_11 domain-containing protein. (204 aa)
FFUJ_05728Related to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog. (325 aa)
FFUJ_07295Related to S.pombe Rnp24p, Nsr1p and human splicing factor. (422 aa)
FFUJ_07414U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (709 aa)
FFUJ_08832RNA helicase. (795 aa)
FFUJ_07614Uncharacterized protein. (284 aa)
FFUJ_06072Probable nucleolar protein 10. (651 aa)
FFUJ_08717Related to MAK11 protein (Maintenance of killer toxin-encoding satellite M1 dsRNA). (488 aa)
FFUJ_08685Related to SAS10 protein, involved in silencing. (616 aa)
FFUJ_08644Probable rRNA processing protein. (293 aa)
FFUJ_08636Related to protein KRI1. (688 aa)
FFUJ_08872annotation not available (374 aa)
FFUJ_08538SRP9-21 domain-containing protein. (126 aa)
FFUJ_08672BRCT domain-containing protein. (454 aa)
FFUJ_08593Uncharacterized protein. (239 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
FFUJ_08548Uncharacterized protein. (319 aa)
FFUJ_07806Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (439 aa)
FFUJ_0788625S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family. (291 aa)
FFUJ_07393Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa)
FFUJ_09100Probable NOP10-nucleolar rRNA processing protein. (61 aa)
FFUJ_08377Uncharacterized protein. (618 aa)
FFUJ_08682Related to DNA-directed RNA polymerase A (I) chain. (439 aa)
FFUJ_08321Related to rRNA processing protein. (339 aa)
FFUJ_05888Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (319 aa)
FFUJ_05948DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (110 aa)
FFUJ_14915Uncharacterized protein. (225 aa)
FFUJ_08831Related to Streptococcus M protein. (691 aa)
FFUJ_12186Probable fibrillarin (NOP1). (318 aa)
FFUJ_08763DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1232 aa)
FFUJ_12260Csm1 domain-containing protein. (467 aa)
FFUJ_12271Uncharacterized protein. (402 aa)
FFUJ_08596Related to RNA processing factor 1. (415 aa)
FFUJ_12294Related to URB1 Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNAs. (1130 aa)
FFUJ_05869Related to Che-1 protein. (545 aa)
FFUJ_08318Related to nuclear VCP-like protein. (756 aa)
FFUJ_08291Probable nucleolar protein NOP58. (593 aa)
FFUJ_12392Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1216 aa)
FFUJ_12692Uncharacterized protein. (144 aa)
FFUJ_06297Related to P.falciparum liver stage antigen LSA-1. (883 aa)
FFUJ_12897Uncharacterized protein. (297 aa)
FFUJ_09873Probable UTP7-U3 snoRNP protein. (552 aa)
FFUJ_09957Related to dna-dependent rna polymerase I subunit a43 (Rpa43). (463 aa)
FFUJ_09788F-box domain-containing protein. (431 aa)
FFUJ_0909920S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (448 aa)
FFUJ_09735Related to 3' exoribonuclease family protein. (283 aa)
FFUJ_09599DNA ligase. (984 aa)
FFUJ_08948tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (451 aa)
FFUJ_09750DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1676 aa)
FFUJ_09789Probable BRX1 Nucleolar protein involved in the assembly of the large ribosomal subunit. (307 aa)
FFUJ_09731DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
FFUJ_08691DUF2431 domain-containing protein. (342 aa)
FFUJ_09631Ribonuclease P protein subunit. (228 aa)
FFUJ_09626Uncharacterized protein. (1258 aa)
FFUJ_08595Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (667 aa)
FFUJ_09886Stc1 domain-containing protein. (415 aa)
FFUJ_09462Related to DNA-directed RNA polymerase small Zn-binding chain. (72 aa)
FFUJ_09452Related to mating protein SSF1. (454 aa)
FFUJ_09815RNA helicase. (587 aa)
FFUJ_09893Related to UTP5 protein. (392 aa)
FFUJ_08302RNA helicase. (635 aa)
FFUJ_09883Uncharacterized protein. (630 aa)
FFUJ_09872annotation not available (816 aa)
FFUJ_08249Probable SIK1-involved in pre-rRNA processing. (511 aa)
FFUJ_09787Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (736 aa)
FFUJ_10513Uncharacterized protein. (135 aa)
FFUJ_12282Probable FUN12-general translation factor eIF2 homolog. (1330 aa)
FFUJ_12589Uncharacterized protein. (428 aa)
FFUJ_11452Uncharacterized protein. (277 aa)
FFUJ_10033Related to lincomycin-condensing protein lmbA. (191 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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