STRINGSTRING
FFUJ_05236 FFUJ_05236 FFUJ_00966 FFUJ_00966 FFUJ_01284 FFUJ_01284 FFUJ_01030 FFUJ_01030 FFUJ_00867 FFUJ_00867 FFUJ_01108 FFUJ_01108 FFUJ_01205 FFUJ_01205 FFUJ_01190 FFUJ_01190 FFUJ_00856 FFUJ_00856 FFUJ_00251 FFUJ_00251 FFUJ_00077 FFUJ_00077 FFUJ_00177 FFUJ_00177 FFUJ_00228 FFUJ_00228 FFUJ_01495 FFUJ_01495 FFUJ_00439 FFUJ_00439 FFUJ_00493 FFUJ_00493 FFUJ_01681 FFUJ_01681 FFUJ_01756 FFUJ_01756 FFUJ_00583 FFUJ_00583 FFUJ_00660 FFUJ_00660 FFUJ_00471 FFUJ_00471 FFUJ_00476 FFUJ_00476 FFUJ_00703 FFUJ_00703 FFUJ_00796 FFUJ_00796 FFUJ_00839 FFUJ_00839 FFUJ_00919 FFUJ_00919 FFUJ_00944 FFUJ_00944 LSM8 LSM8 FFUJ_01052 FFUJ_01052 FFUJ_00869 FFUJ_00869 FFUJ_01134 FFUJ_01134 FFUJ_00881 FFUJ_00881 FFUJ_01314 FFUJ_01314 FFUJ_01379 FFUJ_01379 FFUJ_01298 FFUJ_01298 FFUJ_01438 FFUJ_01438 FFUJ_01448 FFUJ_01448 FFUJ_01402 FFUJ_01402 FFUJ_01496 FFUJ_01496 FFUJ_01272 FFUJ_01272 FFUJ_01294 FFUJ_01294 FFUJ_01570 FFUJ_01570 FFUJ_01602 FFUJ_01602 FFUJ_01533 FFUJ_01533 FFUJ_01630 FFUJ_01630 FFUJ_01955 FFUJ_01955 FFUJ_11756 FFUJ_11756 FFUJ_11327 FFUJ_11327 FFUJ_09884 FFUJ_09884 FFUJ_12071 FFUJ_12071 FFUJ_11289 FFUJ_11289 FFUJ_09654 FFUJ_09654 FFUJ_11121 FFUJ_11121 FFUJ_09745 FFUJ_09745 FFUJ_09751 FFUJ_09751 FFUJ_09945 FFUJ_09945 FFUJ_10070 FFUJ_10070 FFUJ_10803 FFUJ_10803 FFUJ_10623 FFUJ_10623 FFUJ_11287 FFUJ_11287 FFUJ_12841 FFUJ_12841 FFUJ_12706 FFUJ_12706 FFUJ_11123 FFUJ_11123 FFUJ_09856 FFUJ_09856 FFUJ_10972 FFUJ_10972 FFUJ_12235 FFUJ_12235 FFUJ_12218 FFUJ_12218 FFUJ_10412 FFUJ_10412 FFUJ_10362 FFUJ_10362 FFUJ_10537 FFUJ_10537 FFUJ_09831 FFUJ_09831 FFUJ_10363 FFUJ_10363 FFUJ_09859 FFUJ_09859 FFUJ_09389 FFUJ_09389 FFUJ_09394 FFUJ_09394 FFUJ_09483 FFUJ_09483 FFUJ_09610 FFUJ_09610 FFUJ_09657 FFUJ_09657 FFUJ_09662 FFUJ_09662 FFUJ_09580 FFUJ_09580 FFUJ_09329 FFUJ_09329 FFUJ_08794 FFUJ_08794 FFUJ_08856 FFUJ_08856 FFUJ_09721 FFUJ_09721 FFUJ_10000 FFUJ_10000 FFUJ_10074 FFUJ_10074 FFUJ_09783 FFUJ_09783 FFUJ_05792 FFUJ_05792 FFUJ_06174 FFUJ_06174 LSM1 LSM1 FFUJ_06090 FFUJ_06090 FFUJ_12226 FFUJ_12226 FFUJ_12202 FFUJ_12202 FFUJ_08411 FFUJ_08411 FFUJ_12349 FFUJ_12349 FFUJ_08540 FFUJ_08540 FFUJ_13833 FFUJ_13833 FFUJ_08643 FFUJ_08643 FFUJ_08648 FFUJ_08648 FFUJ_08670 FFUJ_08670 FFUJ_12162 FFUJ_12162 FFUJ_05709 FFUJ_05709 FFUJ_14010 FFUJ_14010 CLP1 CLP1 FFUJ_08870 FFUJ_08870 FFUJ_05674 FFUJ_05674 FFUJ_13773 FFUJ_13773 FFUJ_13817 FFUJ_13817 FFUJ_05594 FFUJ_05594 FFUJ_05582 FFUJ_05582 FFUJ_13933 FFUJ_13933 FFUJ_05589 FFUJ_05589 FFUJ_07926 FFUJ_07926 FFUJ_07702 FFUJ_07702 FFUJ_07393 FFUJ_07393 FFUJ_07843 FFUJ_07843 FFUJ_07816 FFUJ_07816 FFUJ_08553 FFUJ_08553 FFUJ_08407 FFUJ_08407 FFUJ_07984 FFUJ_07984 FFUJ_08453 FFUJ_08453 FFUJ_08496 FFUJ_08496 FFUJ_08513 FFUJ_08513 FFUJ_08587 FFUJ_08587 FFUJ_08623 FFUJ_08623 FFUJ_08634 FFUJ_08634 FFUJ_06083 FFUJ_06083 FFUJ_06066 FFUJ_06066 FFUJ_07598 FFUJ_07598 FFUJ_02804 FFUJ_02804 FFUJ_02601 FFUJ_02601 FFUJ_02870 FFUJ_02870 FFUJ_04099 FFUJ_04099 FFUJ_02832 FFUJ_02832 FFUJ_02597 FFUJ_02597 FFUJ_04243 FFUJ_04243 FFUJ_04323 FFUJ_04323 FFUJ_03278 FFUJ_03278 FFUJ_03214 FFUJ_03214 LSM4 LSM4 FFUJ_04527 FFUJ_04527 FFUJ_04545 FFUJ_04545 FFUJ_03135 FFUJ_03135 FFUJ_03156 FFUJ_03156 FFUJ_05297 FFUJ_05297 FFUJ_03077 FFUJ_03077 FFUJ_03098 FFUJ_03098 FFUJ_04736 FFUJ_04736 FFUJ_03081 FFUJ_03081 FFUJ_03022 FFUJ_03022 FFUJ_03862 FFUJ_03862 FFUJ_02911 FFUJ_02911 FFUJ_03012 FFUJ_03012 FFUJ_02836 FFUJ_02836 FFUJ_02802 FFUJ_02802 FFUJ_02747 FFUJ_02747 FFUJ_02860 FFUJ_02860 FFUJ_02618 FFUJ_02618 FFUJ_02535 FFUJ_02535 FFUJ_02715 FFUJ_02715 FFUJ_02496 FFUJ_02496 FFUJ_02555 FFUJ_02555 FFUJ_02418 FFUJ_02418 FFUJ_02392 FFUJ_02392 FFUJ_04506 FFUJ_04506 FFUJ_02189 FFUJ_02189 FFUJ_04694 FFUJ_04694 FFUJ_04128 FFUJ_04128 FFUJ_00260 FFUJ_00260 FFUJ_04921 FFUJ_04921 FFUJ_05011 FFUJ_05011 FFUJ_00472 FFUJ_00472 FFUJ_03860 FFUJ_03860 FFUJ_04081 FFUJ_04081 FFUJ_00646 FFUJ_00646 FFUJ_04088 FFUJ_04088 FFUJ_04136 FFUJ_04136 FFUJ_04294 FFUJ_04294 FFUJ_01104 FFUJ_01104 FFUJ_04424 FFUJ_04424 FFUJ_00976 FFUJ_00976 FFUJ_00986 FFUJ_00986 FFUJ_04442 FFUJ_04442 FFUJ_04609 FFUJ_04609 FFUJ_04641 FFUJ_04641 FFUJ_04882 FFUJ_04882 FFUJ_00570 FFUJ_00570 FFUJ_00647 FFUJ_00647 FFUJ_01584 FFUJ_01584 FFUJ_00753 FFUJ_00753 FFUJ_00778 FFUJ_00778 FFUJ_01680 FFUJ_01680 FFUJ_00804 FFUJ_00804 FFUJ_13512 FFUJ_13512 FFUJ_03216 FFUJ_03216 FFUJ_13502 FFUJ_13502 FFUJ_13415 FFUJ_13415 FFUJ_13521 FFUJ_13521 FFUJ_13516 FFUJ_13516 LSM5 LSM5 FFUJ_13416 FFUJ_13416 FFUJ_13312 FFUJ_13312 FFUJ_13395 FFUJ_13395 FFUJ_02929 FFUJ_02929 FFUJ_03851 FFUJ_03851 PAN2 PAN2 FFUJ_05708 FFUJ_05708 FFUJ_05680 FFUJ_05680 FFUJ_07057 FFUJ_07057 FFUJ_06325 FFUJ_06325 FFUJ_06454 FFUJ_06454 FFUJ_07999 FFUJ_07999 FFUJ_07923 FFUJ_07923 FFUJ_05871 FFUJ_05871 FFUJ_07759 FFUJ_07759 FFUJ_05969 FFUJ_05969 LSM3 LSM3 FFUJ_05744 FFUJ_05744 FFUJ_05919 FFUJ_05919 FFUJ_05914 FFUJ_05914 FFUJ_05706 FFUJ_05706 FFUJ_05755 FFUJ_05755 FFUJ_07585 FFUJ_07585 PAN3 PAN3 FFUJ_05637 FFUJ_05637 FFUJ_07554 FFUJ_07554 FFUJ_05564 FFUJ_05564 FFUJ_07438 FFUJ_07438 FFUJ_14560 FFUJ_14560 FFUJ_05560 FFUJ_05560 FFUJ_05710 FFUJ_05710 FFUJ_07362 FFUJ_07362 FFUJ_05527 FFUJ_05527 FFUJ_07320 FFUJ_07320 FFUJ_05641 FFUJ_05641 FFUJ_05558 FFUJ_05558 FFUJ_05382 FFUJ_05382 FFUJ_13449 FFUJ_13449 FFUJ_06923 FFUJ_06923 FFUJ_07315 FFUJ_07315 FFUJ_06881 FFUJ_06881 FFUJ_13315 FFUJ_13315 FFUJ_14277 FFUJ_14277 FFUJ_13036 FFUJ_13036 FFUJ_07915 FFUJ_07915 FFUJ_07660 FFUJ_07660 FFUJ_03127 FFUJ_03127 FFUJ_14707 FFUJ_14707 FFUJ_14672 FFUJ_14672 FFUJ_07617 FFUJ_07617 FFUJ_03519 FFUJ_03519 FFUJ_07569 FFUJ_07569 FFUJ_14570 FFUJ_14570 FFUJ_07543 FFUJ_07543 FFUJ_07473 FFUJ_07473 FFUJ_07399 FFUJ_07399 FFUJ_07200 FFUJ_07200 FFUJ_13632 FFUJ_13632 FFUJ_07233 FFUJ_07233 FFUJ_03297 FFUJ_03297 FFUJ_03250 FFUJ_03250 FFUJ_13369 FFUJ_13369 FFUJ_03206 FFUJ_03206 FFUJ_03128 FFUJ_03128 FFUJ_06925 FFUJ_06925 FFUJ_02960 FFUJ_02960 FFUJ_13019 FFUJ_13019 FFUJ_14599 FFUJ_14599 FFUJ_14637 FFUJ_14637 FFUJ_02538 FFUJ_02538 FFUJ_02533 FFUJ_02533 FFUJ_03558 FFUJ_03558 FFUJ_14644 FFUJ_14644 FFUJ_13711 FFUJ_13711 FFUJ_13655 FFUJ_13655
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_05236Uncharacterized protein. (161 aa)
FFUJ_00966Probable pre-mRNA splicing factor ATP-dependent RNA helicase PRP16. (957 aa)
FFUJ_01284PWI domain-containing protein. (420 aa)
FFUJ_01030Uncharacterized protein. (354 aa)
FFUJ_00867Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (123 aa)
FFUJ_01108Uncharacterized protein. (136 aa)
FFUJ_01205Related to RNA helicase. (1247 aa)
FFUJ_01190Related to cold sensitive U2 snRNA supressor. (376 aa)
FFUJ_00856Related to RNA14-component of pre-mRNA 3`-end processing factor CF I. (981 aa)
FFUJ_00251Related to pre-mRNA splicing factor. (243 aa)
FFUJ_00077Protein kinase domain-containing protein. (264 aa)
FFUJ_00177Related to splicing factor 3B subunit 3 (Spliceosomal protein sap130). (1172 aa)
FFUJ_00228Related to Pre-mRNA-splicing factor CWC25. (377 aa)
FFUJ_01495Related to U4/U6 snRNP-associated 61 kDa protein. (630 aa)
FFUJ_00439Related to cactin. (482 aa)
FFUJ_00493Tyrosine--tRNA ligase. (615 aa)
FFUJ_01681Probable DUF866 domain protein. (160 aa)
FFUJ_01756Related to ATP-dependent RNA helicase. (674 aa)
FFUJ_00583Related to A.brasilense nifR3 protein. (764 aa)
FFUJ_00660Related to peptidylprolyl isomerase (Cyclophilin)-like protein. (550 aa)
FFUJ_00471Small nuclear ribonucleoprotein G. (91 aa)
FFUJ_00476Related to putative glutathione S-transferase. (241 aa)
FFUJ_00703Related to MRD1. (857 aa)
FFUJ_00796Related to BRR5-component of pre-mRNA polyadenylation factor PF I. (832 aa)
FFUJ_00839Related to RNA-binding protein. (858 aa)
FFUJ_00919Related to PTA1-pre-tRNA processing protein / PF I subunit. (716 aa)
FFUJ_00944C3H1-type domain-containing protein. (315 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (99 aa)
FFUJ_01052Probable RNA-binding protein (RRM superfamily). (116 aa)
FFUJ_00869U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (120 aa)
FFUJ_01134Related to small nuclear ribonucleoprotein U2B. (203 aa)
FFUJ_00881Related to cleavage stimulation factor 64K chain. (293 aa)
FFUJ_01314Related to DNA-directed RNA polymerase II chain. (158 aa)
FFUJ_01379Related to splicing factor 3A subunit 2. (240 aa)
FFUJ_01298Related to RNA-binding protein. (350 aa)
FFUJ_01438Related to PRP39-pre-mRNA splicing factor. (587 aa)
FFUJ_01448Related to RNA-splicing regulatory protein phosphatase CYT-4, mitochondrial. (1029 aa)
FFUJ_01402Related to ATP dependent RNA helicase. (2209 aa)
FFUJ_01496Probable crooked neck protein CGI-201 (Short form). (674 aa)
FFUJ_01272Related to small nuclear ribonucleoprotein B. (204 aa)
FFUJ_01294Related to arsenite-resistance protein 2. (847 aa)
FFUJ_01570Uncharacterized protein. (309 aa)
FFUJ_01602Probable CDC40-cell division control protein. (529 aa)
FFUJ_01533Probable pleiotropic regulator 1 (PLRG1). (459 aa)
FFUJ_01630Related to RNA binding protein NRD1 protein. (688 aa)
FFUJ_01955Uncharacterized protein. (240 aa)
FFUJ_11756Related to integral membrane protein PTH11. (372 aa)
FFUJ_11327Uncharacterized protein. (275 aa)
FFUJ_09884Uncharacterized protein. (396 aa)
FFUJ_12071NmrA domain-containing protein. (302 aa)
FFUJ_11289Related to heterokaryon incompatibility protein het-6. (1121 aa)
FFUJ_09654Probable TPR domain protein. (571 aa)
FFUJ_11121Related to dis1-suppressing protein kinase dsk1. (497 aa)
FFUJ_09745Related to small nuclear ribonucleoprotein snRNP U1A. (243 aa)
FFUJ_09751Related to U4/U6 small nuclear ribonucleoprotein hPrp3. (468 aa)
FFUJ_09945Uncharacterized protein. (395 aa)
FFUJ_10070Related to dis1-suppressing protein kinase dsk1. (475 aa)
FFUJ_10803Uncharacterized protein. (474 aa)
FFUJ_10623Probable ATP-binding protein PRP16. (367 aa)
FFUJ_11287SKY1-Protein serine kinase. (475 aa)
FFUJ_12841NAD(P)-bd_dom domain-containing protein. (286 aa)
FFUJ_12706Methyltransf_25 domain-containing protein. (255 aa)
FFUJ_11123Related to glutathione-S-transferases. (241 aa)
FFUJ_09856Related to PCF11 component of pre-mRNA 3`-end processing factor CF I. (602 aa)
FFUJ_10972Probable dis1-suppressing protein kinase dsk1; Belongs to the protein kinase superfamily. (413 aa)
FFUJ_12235Related to poly(A) polymerase. (1496 aa)
FFUJ_12218Uncharacterized protein. (474 aa)
FFUJ_10412Related to 2`-hydroxyisoflavone reductase. (299 aa)
FFUJ_10362HeLo domain-containing protein. (573 aa)
FFUJ_10537Related to dis1-suppressing protein kinase dsk1. (456 aa)
FFUJ_09831Uncharacterized protein. (260 aa)
FFUJ_10363Related to RNA helicase MSS116; Belongs to the DEAD box helicase family. (607 aa)
FFUJ_09859Uncharacterized protein. (145 aa)
FFUJ_09389Probable cell cycle control protein cwf19. (687 aa)
FFUJ_09394Endo/exonuclease/phosphatase domain-containing protein. (512 aa)
FFUJ_09483Related to mRNA splicing-associated serine-threonine protein kinase. (806 aa)
FFUJ_09610Related to component of pre-mRNA polyadenylation factor PF I. (330 aa)
FFUJ_09657Related to glutamine rich protein, nitrogen starvation-induced. (204 aa)
FFUJ_09662Related to XAP-5 protein. (363 aa)
FFUJ_09580Uncharacterized protein. (512 aa)
FFUJ_09329Uncharacterized protein. (295 aa)
FFUJ_08794Related to regulatory protein RLR1. (2425 aa)
FFUJ_08856Probable ATP dependent RNA helicase. (1196 aa)
FFUJ_09721Related to Pre-mRNA-splicing factor CWC26. (332 aa)
FFUJ_10000Related to dis1-suppressing protein kinase dsk1. (391 aa)
FFUJ_10074Related to N.crassa uvs2 protein. (273 aa)
FFUJ_09783Related to spliceosome associated protein 145. (603 aa)
FFUJ_05792Splicing factor subunit; Belongs to the SF3B5 family. (80 aa)
FFUJ_06174Probable ATP-dependent RNA helicase. (434 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (169 aa)
FFUJ_06090Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (750 aa)
FFUJ_12226Related to TATA-binding protein associated factor 2N. (349 aa)
FFUJ_12202Related to RTT103 Regulator of Ty1 Transposition. (405 aa)
FFUJ_08411Probable ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family. (523 aa)
FFUJ_12349Probable U1 snRNP protein. (267 aa)
FFUJ_08540Related to histone methyltransferase. (375 aa)
FFUJ_13833Uncharacterized protein. (219 aa)
FFUJ_08643Uncharacterized protein. (238 aa)
FFUJ_08648Related to Pre-mRNA-splicing factor SPP2. (361 aa)
FFUJ_08670Probable Pre-mRNA-splicing factor CWC21. (174 aa)
FFUJ_12162Uncharacterized protein. (385 aa)
FFUJ_05709Uncharacterized protein. (101 aa)
FFUJ_14010Uncharacterized protein. (314 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (448 aa)
FFUJ_08870Related to CTK2 Carboxy-terminal domain (CTD) kinase, beta subunit. (419 aa)
FFUJ_05674Related to N.crassa uvs2 protein. (336 aa)
FFUJ_13773Related to dis1-suppressing protein kinase dsk1. (515 aa)
FFUJ_13817Related to branch point bridging protein (MSL5). (553 aa)
FFUJ_05594Related to cell cycle control protein cwf5. (368 aa)
FFUJ_05582Probable dis1-suppressing protein kinase dsk1. (511 aa)
FFUJ_13933Probable ATP dependent RNA helicase. (345 aa)
FFUJ_05589C2H2-type domain-containing protein. (166 aa)
FFUJ_07926Probable splicing factor PRP8 (U5 snRNP). (3379 aa)
FFUJ_07702Related to non-snRNP spliceosome component (Pre-mRNA splicing protein PRP19). (477 aa)
FFUJ_07393Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
FFUJ_07843Related to integral membrane protein PTH11. (443 aa)
FFUJ_07816Related to dis1-suppressing protein kinase dsk1. (484 aa)
FFUJ_08553Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1439 aa)
FFUJ_08407Cleavage and polyadenylation specificity factor subunit 2. (962 aa)
FFUJ_07984Probable U5 snRNP-specific 40 kD protein (Novel WD-40 repeat protein). (354 aa)
FFUJ_08453Probable ATP-binding protein PRP16. (767 aa)
FFUJ_084965'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (989 aa)
FFUJ_08513Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (635 aa)
FFUJ_08587Uncharacterized protein. (349 aa)
FFUJ_08623Nuclear cap-binding protein subunit 2. (173 aa)
FFUJ_08634RING-type domain-containing protein. (921 aa)
FFUJ_06083CID domain-containing protein. (790 aa)
FFUJ_06066mRNA cap guanine-N7 methyltransferase. (477 aa)
FFUJ_07598Related to mRNA splicing factor. (217 aa)
FFUJ_02804U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (554 aa)
FFUJ_02601Probable spliceosome-associated protein SAP-49. (357 aa)
FFUJ_02870annotation not available (294 aa)
FFUJ_04099Related to C2C2-type Zn-finger protein. (345 aa)
FFUJ_02832Related to microfibril-associated protein. (464 aa)
FFUJ_02597Related to C.elegans dom-3 protein. (374 aa)
FFUJ_04243Related to RNA-binding proteins. (323 aa)
FFUJ_04323Uncharacterized protein. (533 aa)
FFUJ_03278Related to U1 small nuclear ribonucleoprotein. (392 aa)
FFUJ_03214DUF2040 domain-containing protein. (400 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (123 aa)
FFUJ_04527Uncharacterized protein. (308 aa)
FFUJ_04545Related to U2 snRNP protein A. (243 aa)
FFUJ_03135Probable Pre-mRNA-splicing factor syf2. (264 aa)
FFUJ_03156J domain-containing protein. (282 aa)
FFUJ_05297Probable IRE1-protein kinase. (1255 aa)
FFUJ_03077Related to cell division cycle 2-related protein kinase 7. (994 aa)
FFUJ_03098Uncharacterized protein. (176 aa)
FFUJ_04736Related to molecular chaperone (DnaJ superfamily). (214 aa)
FFUJ_03081Related to SAD1-SnRNP assembly defective. (538 aa)
FFUJ_03022Probable U5 snRNP 100 kD protein; Belongs to the DEAD box helicase family. (723 aa)
FFUJ_03862Uncharacterized protein. (349 aa)
FFUJ_02911mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (389 aa)
FFUJ_03012Probable splicing factor u2af 35 kd subunit (Small subunit). (209 aa)
FFUJ_02836Small nuclear ribonucleoprotein Sm D2. (118 aa)
FFUJ_02802Probable nuclear protein. (1210 aa)
FFUJ_02747Related to U1 snRNP protein. (784 aa)
FFUJ_02860Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
FFUJ_02618Related to cap binding protein 80 (Cbp80). (797 aa)
FFUJ_02535Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (123 aa)
FFUJ_02715Probable leucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (949 aa)
FFUJ_02496Probable cyclin-dependent ser/thr protein kinase KIN28; Belongs to the protein kinase superfamily. (424 aa)
FFUJ_02555Related to S.pombe beta-transducin. (352 aa)
FFUJ_02418mRNA_triPase domain-containing protein. (850 aa)
FFUJ_02392Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1047 aa)
FFUJ_04506Related to C2H2 finger domain protein. (237 aa)
FFUJ_02189Protein kinase domain-containing protein. (386 aa)
FFUJ_04694Related to myb-related protein cdc5. (778 aa)
FFUJ_04128Questionable protein. (310 aa)
FFUJ_00260Related to integral membrane protein PTH11. (387 aa)
FFUJ_04921Related to DNA-directed RNA polymerase II accessory protein. (409 aa)
FFUJ_05011Probable dead-box protein CYT-19; Belongs to the DEAD box helicase family. (675 aa)
FFUJ_00472Uncharacterized protein. (461 aa)
FFUJ_03860Related to pre-mRNA 3`-end processing factor CF II. (1386 aa)
FFUJ_04081Uncharacterized protein. (270 aa)
FFUJ_00646Probable protein of the 3` processing complex. (252 aa)
FFUJ_04088Probable ribosomal elongation factor EF-2. (983 aa)
FFUJ_04136Related to growth regulation protein WHI2. (690 aa)
FFUJ_04294Ubiquitin-like domain-containing protein. (232 aa)
FFUJ_01104Related to meiotically up-regulated gene 161 protein. (553 aa)
FFUJ_04424Related to single-stranded TG1-3 binding protein. (408 aa)
FFUJ_00976Related to LSM6-Sm-like (Lsm) protein. (83 aa)
FFUJ_00986Related to U4/U6 small nuclear ribonucleoprotein. (519 aa)
FFUJ_04442Uncharacterized protein. (680 aa)
FFUJ_04609Related to U1 snRNP protein. (566 aa)
FFUJ_04641Probable pre-mRNA-splicing factor 38A. (261 aa)
FFUJ_04882Related to leucine permease transcriptional regulator. (533 aa)
FFUJ_00570Uncharacterized protein. (191 aa)
FFUJ_00647Related to methyltransferase. (359 aa)
FFUJ_01584Related to snRNP protein SMX3. (89 aa)
FFUJ_00753Related to suppressor of cs mutant of sua7. (255 aa)
FFUJ_00778Related to mitochondrial rRNA processing protein PRP12. (870 aa)
FFUJ_01680Uncharacterized protein. (192 aa)
FFUJ_00804Related to lariat-debranching enzyme. (553 aa)
FFUJ_13512Related to DNA binding protein SART-1. (644 aa)
FFUJ_03216Related to splicing factor 3B subunit 3 (Spliceosomal protein sap130). (1192 aa)
FFUJ_13502Sde2_N_Ubi domain-containing protein. (282 aa)
FFUJ_13415Probable ATP-binding protein PRP16. (668 aa)
FFUJ_13521Related to glucan 1,4-alpha-glucosidase. (463 aa)
FFUJ_13516Related to branch point bridging protein (MSL5). (541 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
FFUJ_13416Uncharacterized protein. (480 aa)
FFUJ_13312Probable puff-specific nuclear protein Bx42. (585 aa)
FFUJ_13395Probable RNA splicing factor Pad-1. (566 aa)
FFUJ_02929Probable G10 protein. (148 aa)
FFUJ_03851Related to RNA-binding protein Y14. (153 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1087 aa)
FFUJ_05708RRM domain-containing protein. (258 aa)
FFUJ_05680Related to step II splicing factor SLU7. (467 aa)
FFUJ_07057Probable pre-mRNA splicing protein PRP2. (876 aa)
FFUJ_06325Uncharacterized protein. (267 aa)
FFUJ_06454Uncharacterized protein. (403 aa)
FFUJ_07999Related to nuclear associated protein. (584 aa)
FFUJ_07923Related to potassium channel regulatory factor. (346 aa)
FFUJ_05871Tudor domain-containing protein. (278 aa)
FFUJ_07759Related to isoflavone reductase family protein. (309 aa)
FFUJ_05969Related to RNA-binding protein Y14. (316 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
FFUJ_05744Related to dis1-suppressing protein kinase dsk1. (425 aa)
FFUJ_05919Related to exosome complex exonuclease. (333 aa)
FFUJ_05914Related to RNA binding motif protein. (805 aa)
FFUJ_05706Related to heterogeneous nuclear ribonucleoprotein HRP1. (371 aa)
FFUJ_05755Probable C6 transcription factor. (741 aa)
FFUJ_07585Related to PRP24-pre-mRNA splicing factor. (1079 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (672 aa)
FFUJ_05637Related to spliceosome-associated-protein. (534 aa)
FFUJ_07554Related to BCAS2 family protein. (200 aa)
FFUJ_05564Related to UNR-interacting protein STRAP (Serine-threonine kinase receptor-associated protein). (352 aa)
FFUJ_07438Methyltranfer_dom domain-containing protein. (279 aa)
FFUJ_14560WD_REPEATS_REGION domain-containing protein. (578 aa)
FFUJ_05560Related to dis1-suppressing protein kinase dsk1. (436 aa)
FFUJ_05710Probable ATP-binding protein PRP16. (712 aa)
FFUJ_07362Related to DNA-damage repair protein DRT111. (480 aa)
FFUJ_05527Probable dis1-suppressing protein kinase dsk1; Belongs to the protein kinase superfamily. (409 aa)
FFUJ_07320Related to SRP40 Suppressor of mutant AC40 of RNA polymerase I and III. (318 aa)
FFUJ_05641Related to snRNP protein. (133 aa)
FFUJ_05558Related to dis1-suppressing protein kinase dsk1; Belongs to the protein kinase superfamily. (422 aa)
FFUJ_05382Related to vegetatible incompatibility protein HET-E-1. (225 aa)
FFUJ_13449SNRNP27 domain-containing protein. (248 aa)
FFUJ_06923Probable MNN4-regulates the mannosylphosphorylation. (487 aa)
FFUJ_07315U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (199 aa)
FFUJ_06881Uncharacterized protein. (300 aa)
FFUJ_13315Related to endo-1,3(4)-beta-glucanase. (378 aa)
FFUJ_14277Related to 2`-hydroxyisoflavone reductase. (301 aa)
FFUJ_13036PWI domain-containing protein. (735 aa)
FFUJ_07915Uncharacterized protein. (846 aa)
FFUJ_07660Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
FFUJ_03127Pinin_SDK_memA domain-containing protein. (293 aa)
FFUJ_14707NmrA domain-containing protein. (308 aa)
FFUJ_14672Uncharacterized protein. (655 aa)
FFUJ_07617Probable mago nashi protein. (154 aa)
FFUJ_03519Uncharacterized protein. (633 aa)
FFUJ_07569Related to MPE1 Role in mRNA 3` end formation. (620 aa)
FFUJ_14570Related to formin binding protein. (284 aa)
FFUJ_07543Related to Pol II transcription elongation factor. (598 aa)
FFUJ_07473Uncharacterized protein. (208 aa)
FFUJ_07399F-box domain-containing protein. (615 aa)
FFUJ_07200Probable pre-mRNA splicing factor prp1. (930 aa)
FFUJ_13632Related to sgt1 protein. (608 aa)
FFUJ_07233Probable heterogeneous nuclear ribonucleoprotein HRP1. (512 aa)
FFUJ_03297Related to polyadenylation factor I subunit 2. (617 aa)
FFUJ_03250Related to CWC22-involved in mRNA splicing. (868 aa)
FFUJ_13369Related to CWC2-involved in mRNA splicing. (404 aa)
FFUJ_03206Related to CTD kinase subunit gamma. (258 aa)
FFUJ_03128Probable pre-mRNA splicing factor. (110 aa)
FFUJ_06925Related to tuftelin-interacting protein 11. (788 aa)
FFUJ_02960Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (264 aa)
FFUJ_13019Related to RNA splicing factor PRP9. (501 aa)
FFUJ_14599Related to protein kinase. (452 aa)
FFUJ_14637Related to putative glutathione S-transferase. (246 aa)
FFUJ_02538Related to nuclear protein ES2. (450 aa)
FFUJ_02533Related to YJU2-Essential nuclear protein, putative spliceosomal component. (265 aa)
FFUJ_03558Related to dis1-suppressing protein kinase dsk1. (425 aa)
FFUJ_14644NmrA domain-containing protein. (304 aa)
FFUJ_13711Zn(2)-C6 fungal-type domain-containing protein. (717 aa)
FFUJ_13655Uncharacterized protein. (587 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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