STRINGSTRING
FFUJ_09607 FFUJ_09607 FFUJ_13241 FFUJ_13241 FFUJ_03071 FFUJ_03071 FFUJ_13488 FFUJ_13488 FFUJ_05717 FFUJ_05717 FFUJ_05919 FFUJ_05919 FFUJ_06167 FFUJ_06167 FFUJ_06498 FFUJ_06498 FFUJ_08644 FFUJ_08644 FFUJ_08321 FFUJ_08321 FFUJ_12282 FFUJ_12282 FFUJ_07706 FFUJ_07706 FFUJ_07502 FFUJ_07502 FFUJ_01407 FFUJ_01407 FFUJ_01823 FFUJ_01823 FFUJ_01279 FFUJ_01279 FFUJ_04008 FFUJ_04008 FFUJ_07298 FFUJ_07298 FFUJ_02621 FFUJ_02621
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_09607Uncharacterized protein. (270 aa)
FFUJ_13241Related to nucleolar 100K polymyositis-scleroderma protein. (811 aa)
FFUJ_030715'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1414 aa)
FFUJ_13488Related to ubiquitin fusion degradation protein. (361 aa)
FFUJ_05717Related to small unique nuclear receptor co-repressor. (185 aa)
FFUJ_05919Related to exosome complex exonuclease. (333 aa)
FFUJ_06167annotation not available (245 aa)
FFUJ_06498Related to DNA-directed DNA polymerase. (689 aa)
FFUJ_08644Probable rRNA processing protein. (293 aa)
FFUJ_08321Related to rRNA processing protein. (339 aa)
FFUJ_12282Probable FUN12-general translation factor eIF2 homolog. (1330 aa)
FFUJ_07706Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (401 aa)
FFUJ_07502Related to 3`->5` exoribonuclease. (333 aa)
FFUJ_01407Probable nuclear protein localization factor and ER translocation component NPL4. (646 aa)
FFUJ_01823Probable 26S protease subunit RPT6; Belongs to the AAA ATPase family. (389 aa)
FFUJ_01279Related to RRP46 protein, involved in rRNA processing. (250 aa)
FFUJ_04008Related to 3`-5` exoribonuclease required for 3` end formation of 5.8S rRNA. (268 aa)
FFUJ_07298Uncharacterized protein. (631 aa)
FFUJ_02621Probable CSL4-core component of the 3`-5` exosome. (208 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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