STRINGSTRING
FFUJ_07298 FFUJ_07298 FFUJ_01879 FFUJ_01879 FFUJ_01279 FFUJ_01279 FFUJ_04008 FFUJ_04008 FFUJ_13241 FFUJ_13241 FFUJ_02621 FFUJ_02621 FFUJ_07502 FFUJ_07502 FFUJ_05919 FFUJ_05919 FFUJ_06167 FFUJ_06167 FFUJ_06498 FFUJ_06498 FFUJ_08644 FFUJ_08644 FFUJ_08321 FFUJ_08321
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_07298Uncharacterized protein. (631 aa)
FFUJ_01879Probable ATP dependent RNA helicase. (1039 aa)
FFUJ_01279Related to RRP46 protein, involved in rRNA processing. (250 aa)
FFUJ_04008Related to 3`-5` exoribonuclease required for 3` end formation of 5.8S rRNA. (268 aa)
FFUJ_13241Related to nucleolar 100K polymyositis-scleroderma protein. (811 aa)
FFUJ_02621Probable CSL4-core component of the 3`-5` exosome. (208 aa)
FFUJ_07502Related to 3`->5` exoribonuclease. (333 aa)
FFUJ_05919Related to exosome complex exonuclease. (333 aa)
FFUJ_06167annotation not available (245 aa)
FFUJ_06498Related to DNA-directed DNA polymerase. (689 aa)
FFUJ_08644Probable rRNA processing protein. (293 aa)
FFUJ_08321Related to rRNA processing protein. (339 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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