STRINGSTRING
FFUJ_00883 FFUJ_00883 FFUJ_04914 FFUJ_04914 FFUJ_04718 FFUJ_04718 FFUJ_01103 FFUJ_01103 FFUJ_04944 FFUJ_04944 FFUJ_02649 FFUJ_02649 FFUJ_02874 FFUJ_02874 FFUJ_13159 FFUJ_13159 FFUJ_08563 FFUJ_08563 FFUJ_09099 FFUJ_09099 FFUJ_09872 FFUJ_09872 FFUJ_09464 FFUJ_09464 FFUJ_09873 FFUJ_09873
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_00883annotation not available (549 aa)
FFUJ_04914Related to bystin. (485 aa)
FFUJ_04718Probable RIO2 protein. (406 aa)
FFUJ_01103Related to papaya ringspot virus polyprotein. (2642 aa)
FFUJ_04944KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (320 aa)
FFUJ_02649Related to low-temperature viability protein LTV1. (408 aa)
FFUJ_02874Related to NOP14-nuclear and nucleolar protein with possible role in ribosome biogenesis. (901 aa)
FFUJ_13159rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (342 aa)
FFUJ_08563Probable S3 ribosomal protein; Belongs to the universal ribosomal protein uS3 family. (260 aa)
FFUJ_0909920S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (448 aa)
FFUJ_09872annotation not available (816 aa)
FFUJ_09464Related to RRP1 protein. (239 aa)
FFUJ_09873Probable UTP7-U3 snoRNP protein. (552 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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