STRINGSTRING
FFUJ_08658 FFUJ_08658 FFUJ_00786 FFUJ_00786 FFUJ_01854 FFUJ_01854 FFUJ_04843 FFUJ_04843 FFUJ_02706 FFUJ_02706 LSM4 LSM4 LSM3 LSM3 FFUJ_08352 FFUJ_08352
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_08658Related to YjeF_N domain protein. (710 aa)
FFUJ_00786Related to ars binding protein 2. (656 aa)
FFUJ_01854Related to MUC1 Extracellular alpha-1,4-glucan glucosidase. (1590 aa)
FFUJ_04843Related to topoisomerase II-associated protein. (816 aa)
FFUJ_02706Related to DNA-directed RNA polymerase III, 47 KD subunit. (545 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (123 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
FFUJ_08352Related to SCD6-suppressor of clathrin deficiency. (541 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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