8 items (Fusarium fujikuroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FFUJ_01761	Uncharacterized protein. (143 aa)
	FFUJ_00828	Uncharacterized protein. (97 aa)
	FFUJ_00604	Uncharacterized protein. (91 aa)
	FFUJ_04284	Related to mitotic spindle biogenesis protein Spc19. (171 aa)
	FFUJ_04661	Uncharacterized protein. (69 aa)
	FFUJ_04708	Uncharacterized protein. (415 aa)
	FFUJ_13680	Related to DASH complex component Dam1. (204 aa)
	FFUJ_12481	DAO domain-containing protein. (496 aa)

Your Current Organism:

Fusarium fujikuroi

NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FFUJ_00604	FFUJ_00828	S0DKA5	S0DJS0	Uncharacterized protein.	Uncharacterized protein.	0.918
FFUJ_00604	FFUJ_01761	S0DKA5	S0DHP5	Uncharacterized protein.	Uncharacterized protein.	0.965
FFUJ_00604	FFUJ_04284	S0DKA5	S0DPK8	Uncharacterized protein.	Related to mitotic spindle biogenesis protein Spc19.	0.964
FFUJ_00604	FFUJ_04661	S0DKA5	S0DRY3	Uncharacterized protein.	Uncharacterized protein.	0.692
FFUJ_00604	FFUJ_04708	S0DKA5	S0DU85	Uncharacterized protein.	Uncharacterized protein.	0.951
FFUJ_00604	FFUJ_12481	S0DKA5	S0EE50	Uncharacterized protein.	DAO domain-containing protein.	0.539
FFUJ_00604	FFUJ_13680	S0DKA5	S0DYD3	Uncharacterized protein.	Related to DASH complex component Dam1.	0.967
FFUJ_00828	FFUJ_00604	S0DJS0	S0DKA5	Uncharacterized protein.	Uncharacterized protein.	0.918
FFUJ_00828	FFUJ_01761	S0DJS0	S0DHP5	Uncharacterized protein.	Uncharacterized protein.	0.919
FFUJ_00828	FFUJ_04284	S0DJS0	S0DPK8	Uncharacterized protein.	Related to mitotic spindle biogenesis protein Spc19.	0.920
FFUJ_00828	FFUJ_04661	S0DJS0	S0DRY3	Uncharacterized protein.	Uncharacterized protein.	0.832
FFUJ_00828	FFUJ_04708	S0DJS0	S0DU85	Uncharacterized protein.	Uncharacterized protein.	0.824
FFUJ_00828	FFUJ_12481	S0DJS0	S0EE50	Uncharacterized protein.	DAO domain-containing protein.	0.748
FFUJ_00828	FFUJ_13680	S0DJS0	S0DYD3	Uncharacterized protein.	Related to DASH complex component Dam1.	0.984
FFUJ_01761	FFUJ_00604	S0DHP5	S0DKA5	Uncharacterized protein.	Uncharacterized protein.	0.965
FFUJ_01761	FFUJ_00828	S0DHP5	S0DJS0	Uncharacterized protein.	Uncharacterized protein.	0.919
FFUJ_01761	FFUJ_04284	S0DHP5	S0DPK8	Uncharacterized protein.	Related to mitotic spindle biogenesis protein Spc19.	0.968
FFUJ_01761	FFUJ_04661	S0DHP5	S0DRY3	Uncharacterized protein.	Uncharacterized protein.	0.791
FFUJ_01761	FFUJ_04708	S0DHP5	S0DU85	Uncharacterized protein.	Uncharacterized protein.	0.946
FFUJ_01761	FFUJ_12481	S0DHP5	S0EE50	Uncharacterized protein.	DAO domain-containing protein.	0.687