STRINGSTRING
FFUJ_05597 FFUJ_05597 FFUJ_01279 FFUJ_01279 FFUJ_04008 FFUJ_04008 FFUJ_13559 FFUJ_13559 FFUJ_13227 FFUJ_13227 FFUJ_05919 FFUJ_05919 FFUJ_08644 FFUJ_08644 FFUJ_08321 FFUJ_08321 FFUJ_12278 FFUJ_12278 FFUJ_14201 FFUJ_14201
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FFUJ_05597Probable SKI2-antiviral protein and putative helicase. (1275 aa)
FFUJ_01279Related to RRP46 protein, involved in rRNA processing. (250 aa)
FFUJ_04008Related to 3`-5` exoribonuclease required for 3` end formation of 5.8S rRNA. (268 aa)
FFUJ_13559Related to SKI3-antiviral protein. (1421 aa)
FFUJ_13227Related to GTP-binding protein beta subunit-like protein. (408 aa)
FFUJ_05919Related to exosome complex exonuclease. (333 aa)
FFUJ_08644Probable rRNA processing protein. (293 aa)
FFUJ_08321Related to rRNA processing protein. (339 aa)
FFUJ_12278Related to regulator of nonsense transcripts. (1136 aa)
FFUJ_14201Uncharacterized protein. (105 aa)
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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