38 items (Fusarium fujikuroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FFUJ_08553	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1439 aa)
	FFUJ_00439	Related to cactin. (482 aa)
	FFUJ_07984	Probable U5 snRNP-specific 40 kD protein (Novel WD-40 repeat protein). (354 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	FFUJ_05637	Related to spliceosome-associated-protein. (534 aa)
	FFUJ_07554	Related to BCAS2 family protein. (200 aa)
	FFUJ_07320	Related to SRP40 Suppressor of mutant AC40 of RNA polymerase I and III. (318 aa)
	FFUJ_05641	Related to snRNP protein. (133 aa)
	FFUJ_07926	Probable splicing factor PRP8 (U5 snRNP). (3379 aa)
	FFUJ_05594	Related to cell cycle control protein cwf5. (368 aa)
	FFUJ_08643	Uncharacterized protein. (238 aa)
	FFUJ_06278	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
	FFUJ_01496	Probable crooked neck protein CGI-201 (Short form). (674 aa)
	FFUJ_01955	Uncharacterized protein. (240 aa)
	FFUJ_01533	Probable pleiotropic regulator 1 (PLRG1). (459 aa)
	FFUJ_01602	Probable CDC40-cell division control protein. (529 aa)
	FFUJ_01570	Uncharacterized protein. (309 aa)
	FFUJ_01272	Related to small nuclear ribonucleoprotein B. (204 aa)
	FFUJ_09783	Related to spliceosome associated protein 145. (603 aa)
	FFUJ_00966	Probable pre-mRNA splicing factor ATP-dependent RNA helicase PRP16. (957 aa)
	FFUJ_01584	Related to snRNP protein SMX3. (89 aa)
	FFUJ_04088	Probable ribosomal elongation factor EF-2. (983 aa)
	FFUJ_04081	Uncharacterized protein. (270 aa)
	FFUJ_02555	Related to S.pombe beta-transducin. (352 aa)
	FFUJ_02802	Probable nuclear protein. (1210 aa)
	FFUJ_02836	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	FFUJ_02533	Related to YJU2-Essential nuclear protein, putative spliceosomal component. (265 aa)
	FFUJ_02538	Related to nuclear protein ES2. (450 aa)
	FFUJ_07200	Probable pre-mRNA splicing factor prp1. (930 aa)
	FFUJ_03127	Pinin_SDK_memA domain-containing protein. (293 aa)
	FFUJ_06881	Uncharacterized protein. (300 aa)
	FFUJ_13499	Related to cyclophilin. (144 aa)
	FFUJ_00471	Small nuclear ribonucleoprotein G. (91 aa)
	FFUJ_00662	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (167 aa)
	FFUJ_01052	Probable RNA-binding protein (RRM superfamily). (116 aa)
	FFUJ_00869	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (120 aa)
	FFUJ_00997	Probable cyclophilin E. (621 aa)
	FFUJ_01379	Related to splicing factor 3A subunit 2. (240 aa)

Your Current Organism:

Fusarium fujikuroi

NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FFUJ_00439	FFUJ_01602	S0DKN3	S0DIA3	Related to cactin.	Probable CDC40-cell division control protein.	0.759
FFUJ_00471	FFUJ_00662	S0DK28	S0DJM1	Small nuclear ribonucleoprotein G.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.712
FFUJ_00471	FFUJ_00869	S0DK28	S0DJA5	Small nuclear ribonucleoprotein G.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.988
FFUJ_00471	FFUJ_00966	S0DK28	S0DM76	Small nuclear ribonucleoprotein G.	Probable pre-mRNA splicing factor ATP-dependent RNA helicase PRP16.	0.954
FFUJ_00471	FFUJ_00997	S0DK28	S0DIX0	Small nuclear ribonucleoprotein G.	Probable cyclophilin E.	0.679
FFUJ_00471	FFUJ_01052	S0DK28	S0DJF2	Small nuclear ribonucleoprotein G.	Probable RNA-binding protein (RRM superfamily).	0.990
FFUJ_00471	FFUJ_01272	S0DK28	S0DIG0	Small nuclear ribonucleoprotein G.	Related to small nuclear ribonucleoprotein B.	0.997
FFUJ_00471	FFUJ_01379	S0DK28	S0DIU7	Small nuclear ribonucleoprotein G.	Related to splicing factor 3A subunit 2.	0.992
FFUJ_00471	FFUJ_01496	S0DK28	S0DIL8	Small nuclear ribonucleoprotein G.	Probable crooked neck protein CGI-201 (Short form).	0.971
FFUJ_00471	FFUJ_01533	S0DK28	S0DI18	Small nuclear ribonucleoprotein G.	Probable pleiotropic regulator 1 (PLRG1).	0.946
FFUJ_00471	FFUJ_01570	S0DK28	S0DIC4	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.976
FFUJ_00471	FFUJ_01584	S0DK28	S0DMY8	Small nuclear ribonucleoprotein G.	Related to snRNP protein SMX3.	0.999
FFUJ_00471	FFUJ_01602	S0DK28	S0DIA3	Small nuclear ribonucleoprotein G.	Probable CDC40-cell division control protein.	0.973
FFUJ_00471	FFUJ_01955	S0DK28	S0DHH8	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.959
FFUJ_00471	FFUJ_02533	S0DK28	S0DYQ1	Small nuclear ribonucleoprotein G.	Related to YJU2-Essential nuclear protein, putative spliceosomal component.	0.901
FFUJ_00471	FFUJ_02802	S0DK28	S0DTR3	Small nuclear ribonucleoprotein G.	Probable nuclear protein.	0.978
FFUJ_00471	FFUJ_02836	S0DK28	S0DTS5	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D2.	0.999
FFUJ_00471	FFUJ_04081	S0DK28	S0DQI0	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.679
FFUJ_00471	FFUJ_04088	S0DK28	S0DQ22	Small nuclear ribonucleoprotein G.	Probable ribosomal elongation factor EF-2.	0.993
FFUJ_00471	FFUJ_05594	S0DK28	S0EB63	Small nuclear ribonucleoprotein G.	Related to cell cycle control protein cwf5.	0.945