7 items (Fusarium fujikuroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FFUJ_09731	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (148 aa)
	FFUJ_00875	Probable DNA-directed RNA polymerase. (381 aa)
	FFUJ_04750	Probable DNA-directed RNA polymerase chain RPB5. (236 aa)
	FFUJ_02927	Probable DNA-directed RNA polymerase I/III chain AC19. (162 aa)
	FFUJ_03301	Probable DNA-directed RNA polymerase I, II, III 18kD subunit. (154 aa)
	FFUJ_13520	Related to DNA Polymerase iota (POLI). (565 aa)
	FFUJ_08763	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1232 aa)

Your Current Organism:

Fusarium fujikuroi

NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FFUJ_00875	FFUJ_02927	S0DJA1	S0DU06	Probable DNA-directed RNA polymerase.	Probable DNA-directed RNA polymerase I/III chain AC19.	0.999
FFUJ_00875	FFUJ_03301	S0DJA1	S0DY09	Probable DNA-directed RNA polymerase.	Probable DNA-directed RNA polymerase I, II, III 18kD subunit.	0.999
FFUJ_00875	FFUJ_04750	S0DJA1	S0DNB9	Probable DNA-directed RNA polymerase.	Probable DNA-directed RNA polymerase chain RPB5.	0.999
FFUJ_00875	FFUJ_08763	S0DJA1	S0EBN6	Probable DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
FFUJ_00875	FFUJ_09731	S0DJA1	S0EFK5	Probable DNA-directed RNA polymerase.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
FFUJ_02927	FFUJ_00875	S0DU06	S0DJA1	Probable DNA-directed RNA polymerase I/III chain AC19.	Probable DNA-directed RNA polymerase.	0.999
FFUJ_02927	FFUJ_03301	S0DU06	S0DY09	Probable DNA-directed RNA polymerase I/III chain AC19.	Probable DNA-directed RNA polymerase I, II, III 18kD subunit.	0.999
FFUJ_02927	FFUJ_04750	S0DU06	S0DNB9	Probable DNA-directed RNA polymerase I/III chain AC19.	Probable DNA-directed RNA polymerase chain RPB5.	0.999
FFUJ_02927	FFUJ_08763	S0DU06	S0EBN6	Probable DNA-directed RNA polymerase I/III chain AC19.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
FFUJ_02927	FFUJ_09731	S0DU06	S0EFK5	Probable DNA-directed RNA polymerase I/III chain AC19.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
FFUJ_03301	FFUJ_00875	S0DY09	S0DJA1	Probable DNA-directed RNA polymerase I, II, III 18kD subunit.	Probable DNA-directed RNA polymerase.	0.999
FFUJ_03301	FFUJ_02927	S0DY09	S0DU06	Probable DNA-directed RNA polymerase I, II, III 18kD subunit.	Probable DNA-directed RNA polymerase I/III chain AC19.	0.999
FFUJ_03301	FFUJ_04750	S0DY09	S0DNB9	Probable DNA-directed RNA polymerase I, II, III 18kD subunit.	Probable DNA-directed RNA polymerase chain RPB5.	0.999
FFUJ_03301	FFUJ_08763	S0DY09	S0EBN6	Probable DNA-directed RNA polymerase I, II, III 18kD subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
FFUJ_03301	FFUJ_09731	S0DY09	S0EFK5	Probable DNA-directed RNA polymerase I, II, III 18kD subunit.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
FFUJ_04750	FFUJ_00875	S0DNB9	S0DJA1	Probable DNA-directed RNA polymerase chain RPB5.	Probable DNA-directed RNA polymerase.	0.999
FFUJ_04750	FFUJ_02927	S0DNB9	S0DU06	Probable DNA-directed RNA polymerase chain RPB5.	Probable DNA-directed RNA polymerase I/III chain AC19.	0.999
FFUJ_04750	FFUJ_03301	S0DNB9	S0DY09	Probable DNA-directed RNA polymerase chain RPB5.	Probable DNA-directed RNA polymerase I, II, III 18kD subunit.	0.999
FFUJ_04750	FFUJ_08763	S0DNB9	S0EBN6	Probable DNA-directed RNA polymerase chain RPB5.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
FFUJ_04750	FFUJ_09731	S0DNB9	S0EFK5	Probable DNA-directed RNA polymerase chain RPB5.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999